Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_P13
         (569 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CF25F Cluster: hypothetical protein TTHERM_0005...    34   2.7  
UniRef50_Q22SS2 Cluster: Putative uncharacterized protein; n=3; ...    34   2.7  
UniRef50_Q6L2X5 Cluster: Alpha-mannosidase; n=1; Picrophilus tor...    33   4.7  

>UniRef50_UPI00006CF25F Cluster: hypothetical protein
           TTHERM_00056160; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00056160 - Tetrahymena
           thermophila SB210
          Length = 511

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +3

Query: 108 VDTSIYFYKMTKHHFTSFIFEIIQPDLNF-IAAIIITLTVHAWQRIILSWTYKYNL*WFS 284
           V  + +   +TK++F  FI   +QP + F I  I   L +  + +I+  + + +N  +FS
Sbjct: 362 VQNNFFVQFVTKYYFFLFILSTLQPTILFLIVPIEFPLNIQLYLKIVGQFVFSHNQ-FFS 420

Query: 285 LCSPEYLSTHNSYQKSNFYF 344
                Y    N Y K N Y+
Sbjct: 421 ----SYEEQGNDYTKQNQYY 436


>UniRef50_Q22SS2 Cluster: Putative uncharacterized protein; n=3;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2387

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 115  VSTCKYYLDVNYSLYRFCFTG-RKINCWKMGLND*E 11
            +S  K+ +D NY  Y FCF G +K+  W    N+ E
Sbjct: 1503 ISLSKFLIDQNYQRYLFCFNGQKKVYIWNYSKNEQE 1538


>UniRef50_Q6L2X5 Cluster: Alpha-mannosidase; n=1; Picrophilus
           torridus|Rep: Alpha-mannosidase - Picrophilus torridus
          Length = 952

 Score = 33.1 bits (72), Expect = 4.7
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 31  SSNNLSYGR*NKNDISYNLHLDNIYK*IQAY 123
           S N + YG+ N +D SY ++L NIY+ I+ Y
Sbjct: 121 SINEIYYGKINFDDYSYGIYLKNIYELIEKY 151


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,136,867
Number of Sequences: 1657284
Number of extensions: 8753502
Number of successful extensions: 15743
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15740
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)