Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_P13
         (569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    25   2.3  
AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1...    23   7.0  
AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1...    23   7.0  
AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1...    23   7.0  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   7.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.3  

>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -2

Query: 190 FKSGCMISKMKEVKWCLVIL*KYMLVSTCKYYLDVNYSLYRFCFTGRKINCWKMGLN 20
           F+S   + K+K V W +  + + M    C     V ++ Y      R   CWK GL+
Sbjct: 250 FQSFLNLGKLK-VGWSICHIREVMEEQKCYKCWKVGHTSYHCREPDRSNLCWKCGLS 305


>AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 431 FVTLTLFYLLNQQGPYHYNINKLSAC 354
           FV +T   L+ +   ++YNI ++ AC
Sbjct: 48  FVLMTQVTLIYKLEKFNYNIARIQAC 73


>AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 431 FVTLTLFYLLNQQGPYHYNINKLSAC 354
           FV +T   L+ +   ++YNI ++ AC
Sbjct: 48  FVLMTQVTLIYKLEKFNYNIARIQAC 73


>AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 431 FVTLTLFYLLNQQGPYHYNINKLSAC 354
           FV +T   L+ +   ++YNI ++ AC
Sbjct: 48  FVLMTQVTLIYKLEKFNYNIARIQAC 73


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 431 FVTLTLFYLLNQQGPYHYNINKLSAC 354
           FV +T   L+ +   ++YNI ++ AC
Sbjct: 82  FVLMTQVTLIYKLEKFNYNIARIQAC 107


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 161  EGSEMVFSHLVKIYACIY 108
            E S M F H+ K Y C++
Sbjct: 1490 ENSPMNFDHVGKAYLCLF 1507


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,879
Number of Sequences: 2352
Number of extensions: 9863
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)