Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_P10
(726 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 246 3e-66
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 210 2e-55
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 185 7e-48
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 181 1e-46
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 151 7e-38
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 127 2e-30
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 115 8e-27
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 89 8e-19
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 64 2e-11
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 27 2.1
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 27 2.7
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 27 3.6
SPBC83.06c |||mitochondrial ribosomal protein subunit L36|Schizo... 25 8.3
SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|... 25 8.3
SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase Met9|... 25 8.3
SPAPB24D3.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 8.3
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 25 8.3
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 246 bits (601), Expect = 3e-66
Identities = 112/144 (77%), Positives = 121/144 (84%)
Frame = -1
Query: 567 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGD 388
+FDV A+G+PLGRIV KL D VPKTA NFRALCTGEKG+GY GS+FHR+IP FM QGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 387 FTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKH 208
FT NGTGGKSIYG F DENF LKH PG+LSMANAGPNTNGSQFFITTV TPWLD KH
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKH 124
Query: 207 VVFGSVVEGMDVVQKMEKLGSKSG 136
VVFG V EGMDVV+K+E LGS SG
Sbjct: 125 VVFGEVTEGMDVVKKVESLGSNSG 148
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 210 bits (513), Expect = 2e-55
Identities = 100/159 (62%), Positives = 118/159 (74%), Gaps = 1/159 (0%)
Frame = -1
Query: 570 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGG 391
VYFD+ E LGR+ I L VPKTAENFRAL TGEKGFGY+GS FHR+IP+FM QGG
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGG 88
Query: 390 DFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRK 211
D T +GTGGKSIYG F DENFKL H PG+LSMANAGP++NGSQFFITTV TPWLD
Sbjct: 89 DITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGH 148
Query: 210 HVVFGSVVEGMDVVQKMEKLGSKS-GKPIKKVGSXDXGE 97
HVVFG V+ G D+V+K+ K + + KP++ V G+
Sbjct: 149 HVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKIIKSGQ 187
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 185 bits (450), Expect = 7e-48
Identities = 90/160 (56%), Positives = 111/160 (69%), Gaps = 4/160 (2%)
Frame = -1
Query: 567 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG----YKGSSFHRIIPDFMC 400
YF ++ DG+ I +L + VPKT +NF +LC G + G YKGS FHR+I +FM
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 399 QGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWL 220
QGGDFT NGTGG+SIYG F DENF+LKH P +LSMANAGPNTNGSQFFITTVPTP L
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHL 125
Query: 219 DRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVGSXDXG 100
D KHVVFG V++G V+ +E L +K+ P+ V + G
Sbjct: 126 DGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 181 bits (440), Expect = 1e-46
Identities = 96/174 (55%), Positives = 119/174 (68%), Gaps = 9/174 (5%)
Frame = -1
Query: 591 STQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGE------KGFGYKGSS 430
ST+P V+ D+ DG LGRI I+L + VPKTAENFR CTGE K GYK S+
Sbjct: 2 STEP--VVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNST 59
Query: 429 FHRIIPDFMCQGGDFTNHNGTGGKSIYG-RTFSDENFKLKHTGPGILSMANAGPNTNGSQ 253
FHRII FM QGGDF + +GTG +I+ RTF DENF LKH PG+LSMANAG ++NG Q
Sbjct: 60 FHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQ 119
Query: 252 FFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEK--LGSKSGKPIKKVGSXDXGE 97
FFITTVP +LD KHVVFG V+EG D+V+++E +G+ S +P V + GE
Sbjct: 120 FFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANS-RPKSNVAIVECGE 172
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 151 bits (367), Expect = 7e-38
Identities = 78/140 (55%), Positives = 97/140 (69%), Gaps = 2/140 (1%)
Frame = -1
Query: 537 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 358
LG+I+I+L T+ PKT +NF L ++G+ Y G FHR+IPDF+ QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 357 SIYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 181
SIYG F DE + L HTG GILSMANAGPNTN SQFFIT PTPWLD KH +FG VV G
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSG 125
Query: 180 MDVVQKMEKLGS-KSGKPIK 124
+ V ++M + + S +PI+
Sbjct: 126 LSVCKRMGLIRTDSSDRPIE 145
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 127 bits (306), Expect = 2e-30
Identities = 67/128 (52%), Positives = 84/128 (65%), Gaps = 1/128 (0%)
Frame = -1
Query: 534 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 355
G I IKL +E PK +NF E G+ Y + FHRII +FM QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 354 IYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 178
I+ + F DE + LKH P +SMAN+GPNTNGSQFFITT TPWLD KH +F G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 177 DVVQKMEK 154
DVV ++E+
Sbjct: 580 DVVHRIEQ 587
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 115 bits (276), Expect = 8e-27
Identities = 64/133 (48%), Positives = 83/133 (62%), Gaps = 1/133 (0%)
Frame = -1
Query: 534 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 355
G I I+L+TD P NF L ++G+ Y+ + FHR I FM QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 354 IYGRTFSDENFK-LKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 178
I+G+ F DE LKH GI+SMAN G NTNGSQFFI P LD KH +FG VV G+
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGL 400
Query: 177 DVVQKMEKLGSKS 139
+V+ +EK+ + S
Sbjct: 401 NVLDALEKVPTNS 413
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 88.6 bits (210), Expect = 8e-19
Identities = 52/117 (44%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = -1
Query: 534 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 355
G I I+L EVPK NF LC +G+ Y G+ HR++P+F+ QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 354 IYGRTFSDENF-KLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVV 187
IYG F+ E +L+ G++ MA N SQFFIT PTP + K +FG VV
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 64.1 bits (149), Expect = 2e-11
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Frame = -1
Query: 537 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 358
+G +VI L E PKT ENF LC K Y F+ I ++ CQ GD G GG+
Sbjct: 9 VGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGGR 65
Query: 357 SIYG------RTFSDE-NFKLKHTGPGILSMANAGPNTN-------GSQFFITTVPT-PW 223
++ R F E N L H G++SM+ A ++ GSQF IT
Sbjct: 66 CVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEG 125
Query: 222 LDRKHVVFGSVVEGMDVVQKM-EKLGSKSGKPIKKV 118
LD ++ ++G V EG D + K+ + + + G+P + +
Sbjct: 126 LDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDI 161
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 525 LYVPMALRQQLHRNKLVYQVESKQNEVLQQSI 620
LYV +A R+++ R++L Q++++ LQQ +
Sbjct: 434 LYVALAQRKEVRRSQLEAQIQARNQFRLQQQV 465
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 174 HPYLQPQTQILHVFYPTKESELWL*KIETHLYS 272
HP +P T +L+ +P +++ L K++TH+ S
Sbjct: 391 HPPPKPNTGVLNPTFPPEKAPASLEKVDTHVTS 423
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 180 MDVVQKMEKLGSKSGKPIKK 121
M+ +QKM+ L +K G+P KK
Sbjct: 1 MEPIQKMDSLNNKEGQPDKK 20
>SPBC83.06c |||mitochondrial ribosomal protein subunit
L36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 59
Score = 25.4 bits (53), Expect = 8.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 721 HIVXYTGRIYLVCDENPNHDT 659
+ V GR+Y++C ++P H T
Sbjct: 36 YFVRRKGRLYVLCKKHPRHKT 56
>SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 445 PKTFFTSTQSSKV--LSSFRYFIRVQFYDYTSQWL 543
P FF + +++ L S R F+ FYD+T+++L
Sbjct: 16 PSQFFAGSSLNRLSFLRSNREFLNKAFYDHTTRFL 50
>SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase
Met9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 490 SFRYFIRVQFYDYTSQWLSVSSYIEI-NLFIRLSRSK 597
+ RY +R+ + T+ W S SY EI +LF R K
Sbjct: 363 AIRYGLRMSPKEITTSWGSPKSYSEIGDLFARYCEKK 399
>SPAPB24D3.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 300
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 119 TFFIGL-PLLEPSFSIFCTTSIPSTTDPNTTCFLSNQGVGTVVIK 250
TF G PL+EP+F+ + + PN T Q VG + +K
Sbjct: 250 TFTSGYSPLVEPAFTFASALNTTLNSFPNGTLPTQTQVVGDIGVK 294
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 495 KTAENFRALCTGEKGFGYKGSSFHRIIP 412
K A F A+C EKG Y +FH +P
Sbjct: 414 KQALIFDAICLLEKGITYSQHNFHLKLP 441
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,997,697
Number of Sequences: 5004
Number of extensions: 64157
Number of successful extensions: 201
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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