Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_P09
(637 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 25 0.70
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 25 0.70
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.92
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.8
EF532798-1|ABQ08060.1| 50|Tribolium castaneum acetylcholineste... 22 3.7
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 8.6
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 8.6
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 8.6
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 24.6 bits (51), Expect = 0.70
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 264 YCFNLFILGRDLYWLFVSIICY 329
Y FNLF L YWL V + +
Sbjct: 317 YTFNLFYLCFCFYWLLVMVAMF 338
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 24.6 bits (51), Expect = 0.70
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 264 YCFNLFILGRDLYWLFVSIICY 329
Y FNLF L YWL V + +
Sbjct: 273 YTFNLFYLCFCFYWLLVMVAMF 294
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.92
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 513 HRGHCSPLSPGVFPELCHM 457
H G C + PG+F C M
Sbjct: 112 HNGSCLYVPPGIFKSTCKM 130
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 513 HRGHCSPLSPGVFPELCHM 457
H G C + PG+F C M
Sbjct: 112 HGGSCLYVPPGIFKSTCKM 130
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 513 HRGHCSPLSPGVFPELCHM 457
H G C + PG+F C M
Sbjct: 112 HGGSCLYVPPGIFKSTCKM 130
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 513 HRGHCSPLSPGVFPELCHM 457
H G C + PG+F C M
Sbjct: 112 HGGSCLYVPPGIFKSTCKM 130
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 2.8
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 513 HRGHCSPLSPGVFPELC 463
H G C + PG+F C
Sbjct: 112 HNGSCLYVPPGIFKSTC 128
>EF532798-1|ABQ08060.1| 50|Tribolium castaneum
acetylcholinesterase protein.
Length = 50
Score = 22.2 bits (45), Expect = 3.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 389 CTYLFIYLPQGEPTAH*DNNVTNNRNKKPIKV 294
C YL I++PQ H + R K P+ V
Sbjct: 13 CLYLNIWVPQRLRIRHHGDKPPQERPKVPVLV 44
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 8.6
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 303 WLFVSIICYIIVLMGCW 353
W+++ I Y+I +G W
Sbjct: 121 WIWLLIFAYLIPEVGTW 137
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.0 bits (42), Expect = 8.6
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 303 WLFVSIICYIIVLMGCW 353
W+++ I Y+I +G W
Sbjct: 121 WIWLLIFAYLIPEVGTW 137
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 183 VDLVRNLNYKRSKYQR 136
+ L + +NYK+ K+QR
Sbjct: 1195 IQLKQVVNYKKKKFQR 1210
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,439
Number of Sequences: 336
Number of extensions: 2510
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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