Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_P09
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical ...    31   0.52 
Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z75549-4|CAA99919.2|  304|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U53141-8|AAA96110.3|  572|Caenorhabditis elegans Prion-like-(q/n...    27   8.5  
U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U00063-6|AAL50325.2|  246|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical
           protein Y51A2D.12 protein.
          Length = 334

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 15/59 (25%), Positives = 29/59 (49%)
 Frame = +3

Query: 21  NAXGMLKYYNINKLCIKFIEXTQLTKTTTCYSVII*MTSVDISNVYNSNFEQGQQCYFI 197
           N    ++ YN+ K  +K  E +  +   T + + + +TS+ +SN Y +N   G    F+
Sbjct: 200 NVLAGIRLYNMKKKGVKVPETSLFSMAFTVFVIDLFLTSLTVSNYYLTNLAIGSDSDFV 258


>Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical
           protein F29D10.2 protein.
          Length = 149

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 488 PPECSPSCVTCHCSSCGTIC*PIC 417
           P  C   C TC C+ C T C P C
Sbjct: 79  PKCCCTCCRTCCCTRCCTCCRPCC 102


>Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical
           protein C06A1.7 protein.
          Length = 149

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 488 PPECSPSCVTCHCSSCGTIC*PIC 417
           P  C   C TC C+ C T C P C
Sbjct: 81  PKCCCTCCRTCCCTRCCTCCRPCC 104


>Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical
           protein C06A1.6 protein.
          Length = 152

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 488 PPECSPSCVTCHCSSCGTIC*PIC 417
           P  C   C TC C+ C T C P C
Sbjct: 84  PKCCCTCCRTCCCTRCCTCCRPCC 107


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 479 CSPSCVTCHCSSCGTIC*PIC 417
           C   C TC C+ C T C P C
Sbjct: 100 CCTCCRTCCCTRCCTCCRPCC 120


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 479 CSPSCVTCHCSSCGTIC*PIC 417
           C   C TC C+ C T C P C
Sbjct: 98  CCTCCRTCCCTRCCTCCRPCC 118


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 479 CSPSCVTCHCSSCGTIC*PIC 417
           C   C TC C+ C T C P C
Sbjct: 99  CCTCCRTCCCTRCCTCCRPCC 119


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 479 CSPSCVTCHCSSCGTIC*PIC 417
           C   C TC C+ C T C P C
Sbjct: 99  CCTCCRTCCCTRCCTCCRPCC 119


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 479 CSPSCVTCHCSSCGTIC*PIC 417
           C   C TC C+ C T C P C
Sbjct: 100 CCTCCRTCCCTRCCTCCRPCC 120


>Z75549-4|CAA99919.2|  304|Caenorhabditis elegans Hypothetical
           protein T19C4.4 protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 99  TTTCYSVII*MTSVDISNVYNSNFEQGQQCYFI 197
           TTTC SV + +TS+ I N  N    Q  +  FI
Sbjct: 186 TTTCVSVFVNVTSIAIVNQMNVQVRQEVEYNFI 218


>U53141-8|AAA96110.3|  572|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 13
           protein.
          Length = 572

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 485 PECSPSCVTCHCSSCGTIC*PIC 417
           P C PSCV    SSC   C P+C
Sbjct: 180 PACLPSCVQ---SSCAPACQPMC 199


>U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical
           protein F35A5.4 protein.
          Length = 524

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 485 PECSPSCVTCHCSSCGTIC*PIC 417
           P CSPSCV  + S C   C P+C
Sbjct: 268 PSCSPSCVQQY-SLCPQQCRPMC 289


>U00063-6|AAL50325.2|  246|Caenorhabditis elegans Hypothetical
           protein F56C9.11 protein.
          Length = 246

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 521 GLSTEVIVHRSPPECSPSCVTCHCSSCGTIC*PICP 414
           G+S E + + SPPE SP  V     +   +  PI P
Sbjct: 210 GISDETVSNASPPEKSPRLVNSPMPAMNQLLSPILP 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,236,543
Number of Sequences: 27780
Number of extensions: 226918
Number of successful extensions: 593
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)