Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_P06
         (606 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   2.3  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   2.3  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   4.1  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   4.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.4  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   5.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.4  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   9.4  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 175 NDCIIRYFNVSNISKILKQN 234
           N+CI++ FN+ + S   K+N
Sbjct: 63  NECILKQFNIVDESGNFKEN 82


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 175 NDCIIRYFNVSNISKILKQN 234
           N+CI++ FN+ + S   K+N
Sbjct: 63  NECILKQFNIVDESGNFKEN 82


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 353 VIPTNSFEWLYFSILTIIAELGEKVT 430
           ++PT    +L   +  + AE GEKVT
Sbjct: 241 ILPTVLISFLCVLVFYLPAEAGEKVT 266


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 163 NSKENDCIIRYFNVSNISKI 222
           N+  N+C   Y+N+ NI +I
Sbjct: 345 NNYNNNCKKLYYNIINIEQI 364


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -1

Query: 576 WYPRR--NACVFVGNLGSKTITADLSTMFYGGKVIAGTNSSL 457
           +Y RR   AC   G + SK+ T   S   YG  + A   ++L
Sbjct: 580 FYKRRPQRACSTTGGVPSKSPTLTHSPTMYGDALNANLQAAL 621


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 538 ITDKNAGISTRVPXLNHN 591
           +TDK + ++  +P L HN
Sbjct: 305 VTDKKSKVNFALPELQHN 322


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +2

Query: 371 FEWLYFSILTIIAELGEKVTFSKYN 445
           F+W   S L  +  LG K     YN
Sbjct: 396 FDWCAVSCLRELRNLGRKTIMVNYN 420


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 483 VIAGTNSSLIGQVLYFEKVTFSPNSAIIVKMEK*SHS 373
           V A   S L+  +L   +  F P+  I ++++K SH+
Sbjct: 759 VFACNRSELVEAILKRVQTPFDPDVPIELQIQKQSHT 795


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 511 FIYNVLWWES 482
           F+ N LWWE+
Sbjct: 420 FVGNSLWWEN 429


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,002
Number of Sequences: 438
Number of extensions: 2659
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)