Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_P05
         (732 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6X8H4 Cluster: Putative uncharacterized protein; n=1; ...    35   1.8  
UniRef50_Q5UFR4 Cluster: Cya1625; n=1; Mycobacterium smegmatis|R...    33   7.2  
UniRef50_A2Q1T0 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_A6X8H4 Cluster: Putative uncharacterized protein; n=1;
           Ochrobactrum anthropi ATCC 49188|Rep: Putative
           uncharacterized protein - Ochrobactrum anthropi (strain
           ATCC 49188 / DSM 6882 / NCTC 12168)
          Length = 1112

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -2

Query: 209 PPSTTTVDTLDLRQML*YIFLINSGDAPQFSESCIFY 99
           PPS  TVD  D  Q++ ++F + S +APQ ++S ++Y
Sbjct: 752 PPSGQTVDPTDNSQIITFVFRLLSNNAPQQNQSILWY 788


>UniRef50_Q5UFR4 Cluster: Cya1625; n=1; Mycobacterium smegmatis|Rep:
           Cya1625 - Mycobacterium smegmatis
          Length = 369

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = +3

Query: 504 PSRRQDGSEGAH----HRSLNLSGSVSCVAVASRVGVAVWSALRRLPRA 638
           PSRR  GS        H +L++   +S V+ A  V   VWSALR + RA
Sbjct: 81  PSRRSSGSPDDRGLGPHWTLSVGFVISTVSAAVMVVATVWSALREIARA 129


>UniRef50_A2Q1T0 Cluster: Putative uncharacterized protein; n=1;
           Medicago truncatula|Rep: Putative uncharacterized
           protein - Medicago truncatula (Barrel medic)
          Length = 469

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = -2

Query: 443 DKTVSWSRSSTNVSIYYNIV*FIVSEYYC*LNRLTLFVENLVPTNLMKQIN 291
           D  +S+ RSS+ + +Y N   FI  +YY  L  L  FV+N+ P N++  ++
Sbjct: 292 DPIISYLRSSSQLKVYMNF--FI--DYYHHLCNLREFVQNIKPQNVLSSLS 338


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,806,774
Number of Sequences: 1657284
Number of extensions: 9078881
Number of successful extensions: 17013
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16959
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)