Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_O24
(679 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 165 5e-42
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 112 4e-26
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 107 2e-24
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 105 6e-24
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 97 2e-21
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 90 2e-19
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 85 1e-17
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 78 1e-15
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 77 2e-15
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 77 3e-15
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 75 1e-14
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 71 2e-13
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 69 6e-13
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 47 3e-06
SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit 1|Schizosacchar... 29 0.62
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 26 4.4
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 4.4
SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr... 26 5.8
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 5.8
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 26 5.8
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 26 5.8
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 26 5.8
SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase Agn2|Schizo... 25 7.6
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 165 bits (401), Expect = 5e-42
Identities = 79/146 (54%), Positives = 100/146 (68%), Gaps = 1/146 (0%)
Frame = -1
Query: 526 QNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFPESE-NLFK 350
QN NPH S K S D H+V+KRL+ ELM LM + GISAFP+S+ NL
Sbjct: 6 QNQNPHTNS-----KNSSSAGMAVDGHSVTKRLRSELMSLMMSNTPGISAFPDSDSNLLH 60
Query: 349 WIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDK 170
W GTI GP +T Y G K+K+S+ FP +YPY+PP + F +P +HPNVD G ICLDILKDK
Sbjct: 61 WAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDK 120
Query: 169 WTALYDVRTVLLSIQSLLAEPKYTKP 92
W+A+Y+V+T+LLS+QSLL EP P
Sbjct: 121 WSAVYNVQTILLSLQSLLGEPNNASP 146
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 105 NTQSPLNQQASYLW-PNQAAYKKYLDEFYNK 16
N SPLN QA+ LW + YK+ L + Y +
Sbjct: 142 NNASPLNAQAAELWSKDPIEYKRLLMQRYKE 172
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 112 bits (270), Expect = 4e-26
Identities = 52/118 (44%), Positives = 72/118 (61%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
KR+ +EL +L + SA P ++LF W TI GP ++ YAG + LS+ FP YP+
Sbjct: 4 KRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFK 63
Query: 256 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYTKPFKP 83
PP V F T +HPN+++ G ICLDIL+D+W+ + VLLSI SLL +P P P
Sbjct: 64 PPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 107 bits (256), Expect = 2e-24
Identities = 48/115 (41%), Positives = 69/115 (60%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
+RL ++ + + G+SA P S+N+ W I GP +T + +KL L F YP
Sbjct: 7 RRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNK 66
Query: 256 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYTKP 92
PP+VKF++ FHPNV G +CLDIL+++W+ YDV +L SIQSLL +P P
Sbjct: 67 PPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASP 121
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 105 bits (252), Expect = 6e-24
Identities = 52/118 (44%), Positives = 69/118 (58%)
Frame = -1
Query: 445 AVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSY 266
A+ KR+ KE+ L R GI A P +NL + T+ GP ++ Y G K+ L L P+ Y
Sbjct: 2 ALPKRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEY 61
Query: 265 PYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYTKP 92
P PP V+F+T +HPNVD G ICL LK W+ +RTVLLSIQ+L+ P P
Sbjct: 62 PMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDP 119
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 97.1 bits (231), Expect = 2e-21
Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Frame = -1
Query: 460 LKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLE 281
+ DN S+R+ KEL ++ + GI + ++++ G GP T Y G + + +E
Sbjct: 1 MSDNR--SRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIE 58
Query: 280 FPNSYPYAPPVVKFMTPCFHPNVDT-CGLICLDILKDKWTALYDVRTVLLSIQSLLAEPK 104
P YP+ PP + F T +HPNV + G ICLDILKD+W+ +Y +++ L+S+QSLL P+
Sbjct: 59 IPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPE 118
Query: 103 YTKP 92
+ P
Sbjct: 119 PSNP 122
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 90.2 bits (214), Expect = 2e-19
Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = -1
Query: 439 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 260
S+RL KE +L I +NLF W T GP ++VYAG K+ SL+FP YP+
Sbjct: 9 SRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPF 68
Query: 259 APPVVKFMTPCFHPNVDTCGLICLDILKDK-WTALYDVRTVLLSIQSLLAEPKYTKP 92
PP ++F T +HPN D+ G +CL ILK + + +R+VL I LL EP P
Sbjct: 69 QPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDP 125
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 84.6 bits (200), Expect = 1e-17
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 14/124 (11%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESEN-LFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 260
+RL KE EL GI+A P +E+ F W I GP T + G Y +L+FP+ YP
Sbjct: 8 RRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPL 67
Query: 259 APPVVKFMTPCFHPNVDTCGLICLDIL-------------KDKWTALYDVRTVLLSIQSL 119
PP +KF FHPNV G +C+ IL ++W+ + V +LLS+ S+
Sbjct: 68 GPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSM 127
Query: 118 LAEP 107
LAEP
Sbjct: 128 LAEP 131
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 77.8 bits (183), Expect = 1e-15
Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Frame = -1
Query: 433 RLQKELMELMRCSDKGISAFP--ESE---NLFKWIGTINGPLETVYAGHKYKLSLEFPNS 269
RLQ+E + R G A P S+ +L W I G +T + G YKL++ FP
Sbjct: 8 RLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEE 67
Query: 268 YPYAPPVVKFMTPCFHPNVDTCGLICLDILKDK--WTALYDVRTVLLSIQSLLAEPKYTK 95
YP PP +F P FHPNV G +CL IL ++ W ++ +LL IQ LL +P
Sbjct: 68 YPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIAS 127
Query: 94 P 92
P
Sbjct: 128 P 128
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 77.0 bits (181), Expect = 2e-15
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Frame = -1
Query: 445 AVSKRLQKELMELMRCSDKGISA-FPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNS 269
A + L+K+L E+ + +G S + +++F+W I GP +T+Y G + +L FP
Sbjct: 5 ASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQD 64
Query: 268 YPYAPPVVKFMTPCFHPNVDTCGLICLDILK-------------DKWTALYDVRTVLLSI 128
YP PP +KF T +HPNV G +C+ IL ++W ++ T+L+S+
Sbjct: 65 YPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISV 124
Query: 127 QSLLAEPKYTKP 92
S+L+ P P
Sbjct: 125 ISMLSSPNDESP 136
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 76.6 bits (180), Expect = 3e-15
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAF-PESE-NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYP 263
KRL KE G+ P ++ ++F W I GP ET Y G ++ L + YP
Sbjct: 6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYP 65
Query: 262 YAPPVVKFMTPCFHPNVD-TCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYTKP 92
+PP V F T HPN+ T G +C+DILK W+ + +++ L+I SLL+ + P
Sbjct: 66 ISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSP 123
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 74.5 bits (175), Expect = 1e-14
Identities = 37/131 (28%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
+R++ ++M+L+ SD ++ ++N+ ++ +GP ET Y+G +K+ +E P+ YP+
Sbjct: 6 RRIETDVMKLLM-SDYEVTLV--NDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWK 62
Query: 256 PPVVKFMTPCFHPNVD-TCGLICLDILKDKWTALYDVRTVL-LSIQSLLAEPKYTKPFK- 86
P + F+ FHPN+D G +CLD++ W+ ++D+ + + + LL P + P
Sbjct: 63 SPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNG 122
Query: 85 PASIISMAEPS 53
A+ + + EP+
Sbjct: 123 EAAALLLREPN 133
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 70.9 bits (166), Expect = 2e-13
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
KRL KE + L + + + A P +EN+ +W I GP +T Y G +Y +L FP YP+
Sbjct: 8 KRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFK 67
Query: 256 PPVVKFMTPC--FHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYT 98
PP ++ +TP F N C L D W + V T+L+ + S + + T
Sbjct: 68 PPAIRMITPSGRFQTNTRLC-LSFSDFHPKSWNPSWMVSTILVGLVSFMTSDEIT 121
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 68.9 bits (161), Expect = 6e-13
Identities = 27/79 (34%), Positives = 46/79 (58%)
Frame = -1
Query: 328 PLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDV 149
P E Y G K+K ++ ++YP+ PP VK + +HPN+D G +CL+IL+ W + ++
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNL 119
Query: 148 RTVLLSIQSLLAEPKYTKP 92
++L+ +Q L P P
Sbjct: 120 NSILVGLQFLFLSPNAEDP 138
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 46.8 bits (106), Expect = 3e-06
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = -1
Query: 358 LFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLI---C 191
L W TI GP +V+ Y L + +YP APP+V F++ P VD G +
Sbjct: 38 LSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHK 97
Query: 190 LDILKDKWTALYDVRTVLLSIQSLLAEPKYTKPFKP 83
+D L+ W Y + TVLL ++ +A K +P
Sbjct: 98 IDCLR-HWKREYSMETVLLDLKKEMASSSNRKLPQP 132
>SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 232
Score = 29.1 bits (62), Expect = 0.62
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 388 LYHCTALAPLALSGVVCSQHDCLLV*SCLHSA 483
LY C A + ++G VC CL V C H A
Sbjct: 181 LYECNACREIVIAGYVCDCGYCLHVYCCKHLA 212
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 78 ASYLWPNQAAYKKYLDEFYNKHKD 7
ASYL +A Y KY EF KD
Sbjct: 156 ASYLPAQEAVYNKYFKEFLAHSKD 179
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1
Query: 526 QNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMR 401
QNI+ ++ + S K SED KL +N +V + + + ++
Sbjct: 920 QNISTNHTNDSAALKSSEDHSKLANNFSVPDSIDHKFYQQVK 961
>SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 473
Score = 25.8 bits (54), Expect = 5.8
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 359 PLQMDRDHQWTFRN 318
P+QMD+DH + F N
Sbjct: 237 PIQMDKDHSYNFAN 250
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -1
Query: 505 ASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISA 377
+ + N + S K++HA K+LQKE + +D + A
Sbjct: 91 SEAENDEESSSQKSNSKESHAQRKKLQKERKAMKPFADTSLKA 133
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 295 KLSLEFPNSYPYAPPVVKFMTPCFHPNV 212
KLS+E+ N P AP +V CF +V
Sbjct: 112 KLSMEWDNIMPNAPGLVNLGNTCFMNSV 139
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -1
Query: 334 NGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDI 182
NG + V+ H L + PY V++ MTP HP+ C L L +
Sbjct: 296 NGAVSGVFTAHDVVLRVLAAGLDPYRSSVIRVMTP--HPD---CALASLRV 341
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 301 KYKLSLEFPNSYPYAPPVVK 242
K L +E SYPY PV+K
Sbjct: 62 KLDLCIELGRSYPYVKPVIK 81
>SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase
Agn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -1
Query: 523 NINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELM--RCSDKGISAFPESENLFK 350
N P+Y SS P +ED + ++++ A +K+ + + + K S F E +
Sbjct: 175 NCWPYYTSS--PTSDAEDLVYIQNSKATNKKYMATVSPIFYTHFTSKNYSFFSEGLWFTR 232
Query: 349 WIGTI 335
W+ I
Sbjct: 233 WMQLI 237
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,834,791
Number of Sequences: 5004
Number of extensions: 60586
Number of successful extensions: 194
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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