Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_O24
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 112 3e-25
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 112 3e-25
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 110 8e-25
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 110 8e-25
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 108 4e-24
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 105 4e-23
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 88 5e-18
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 87 1e-17
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 86 2e-17
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 82 4e-16
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 77 1e-14
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 73 3e-13
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 73 3e-13
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 71 8e-13
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 71 1e-12
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 66 3e-11
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 60 1e-09
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 58 8e-09
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 56 2e-08
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 56 3e-08
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 53 2e-07
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 36 0.027
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 36 0.035
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 29 4.0
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.0
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 29 4.0
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL033514-31|CAA22092.1| 444|Caenorhabditis elegans Hypothetical... 28 5.3
Z72513-2|CAA96670.1| 562|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 27 9.3
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 27 9.3
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 112 bits (269), Expect = 3e-25
Identities = 52/115 (45%), Positives = 68/115 (59%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
+RL ++ +L G+S P +N+ W I GP ET + +KLSLEF YP
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 256 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYTKP 92
PP VKF++ FHPNV G ICLDIL+++W+ YDV +L SIQSLL EP P
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSP 121
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 112 bits (269), Expect = 3e-25
Identities = 52/115 (45%), Positives = 68/115 (59%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
+RL ++ +L G+S P +N+ W I GP ET + +KLSLEF YP
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 256 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYTKP 92
PP VKF++ FHPNV G ICLDIL+++W+ YDV +L SIQSLL EP P
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSP 121
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 110 bits (265), Expect = 8e-25
Identities = 53/118 (44%), Positives = 71/118 (60%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
KR+QKEL +L R SA P ++LF W TI GP E+ Y G + L++ FP YP+
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 256 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYTKPFKP 83
PP V F T +HPN+++ G ICLDIL+ +W+ + VLLSI SLL +P P P
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 110 bits (265), Expect = 8e-25
Identities = 53/118 (44%), Positives = 71/118 (60%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
KR+QKEL +L R SA P ++LF W TI GP E+ Y G + L++ FP YP+
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 256 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYTKPFKP 83
PP V F T +HPN+++ G ICLDIL+ +W+ + VLLSI SLL +P P P
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 108 bits (259), Expect = 4e-24
Identities = 54/115 (46%), Positives = 70/115 (60%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
+R+ KE L+ GISA P+ N + I GP ++ +AG +KL L P YP A
Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 256 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYTKP 92
P V+FMT +HPN+D G ICLDILKDKW+ +RTVLLSIQ+LL+ P P
Sbjct: 67 APKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDP 121
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 105 bits (251), Expect = 4e-23
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 4/118 (3%)
Frame = -1
Query: 433 RLQKELMELM---RCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYP 263
RLQ+E E++ S+ GI +ENL + G I GP +T YAG + L ++ P+ YP
Sbjct: 8 RLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYP 67
Query: 262 YAPPVVKFMTPCFHPNVDT-CGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYTKP 92
++PP VKF T +HPNV + G+ICLDILKD+W A +RTVLLSIQ+L+ P+ P
Sbjct: 68 FSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQALMCTPEPKDP 125
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 88.2 bits (209), Expect = 5e-18
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 13/137 (9%)
Frame = -1
Query: 463 KLKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSL 284
K + + L EL L +G + +NLF W I GP +T+Y G +K S+
Sbjct: 4 KASTSSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASI 63
Query: 283 EFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILK-------------DKWTALYDVRT 143
FP++YPY+PP +KF T +HPNV G +C+ IL ++W VRT
Sbjct: 64 RFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRT 123
Query: 142 VLLSIQSLLAEPKYTKP 92
+LLS+ SLL EP + P
Sbjct: 124 ILLSVISLLNEPNTSSP 140
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 14/127 (11%)
Frame = -1
Query: 430 LQKELMELMRCSDKGISA-FPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAP 254
L+K+L ++ R G SA + +++KW + GP +T+Y G +K L+FP YP P
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 253 PVVKFMTPCFHPNVDTCGLICLDILKD-------------KWTALYDVRTVLLSIQSLLA 113
P +KF++ +HPN+D G +C+ IL D +W ++ V T+LLS+ S+L
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLT 127
Query: 112 EPKYTKP 92
+P + P
Sbjct: 128 DPNFESP 134
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 86.2 bits (204), Expect = 2e-17
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 16/127 (12%)
Frame = -1
Query: 424 KELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVV 245
KE+ ++ GI + NL G I GP T YAG +++ ++ P YP+ PP V
Sbjct: 28 KEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKV 87
Query: 244 ---------------KFMTPCFHPNVDT-CGLICLDILKDKWTALYDVRTVLLSIQSLLA 113
KF+T +HPN+ + G ICLDILKDKWTA +RTVLLS+Q++L
Sbjct: 88 TEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLC 147
Query: 112 EPKYTKP 92
P+ + P
Sbjct: 148 SPEPSDP 154
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 81.8 bits (193), Expect = 4e-16
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFP-ESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 260
KRL E EL +GI A P + +N F+W I GP ET +A + + FP YP
Sbjct: 7 KRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPL 66
Query: 259 APPVVKFMTPCFHPNVDTCGLICLDIL-------------KDKWTALYDVRTVLLSIQSL 119
+PP ++F FHPN+ G +C+ IL ++W+ + + +LLS+ S+
Sbjct: 67 SPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSM 126
Query: 118 LAEPKYTKP 92
LAEP P
Sbjct: 127 LAEPNDESP 135
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 77.0 bits (181), Expect = 1e-14
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Frame = -1
Query: 445 AVSKRLQKELMELMRCSDKGISAFP-ESENLFKWIGTINGPLETVYAGHKYKLSLEFPNS 269
+ ++RLQKEL +L C K E NL KW + P + Y +K+ + FP
Sbjct: 2 SATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVD 60
Query: 268 YPYAPPVVKFMTPCFHPNVDTCGLICLDIL-KDKWTALYDVRTVLLSIQSLLAEPKYTKP 92
YP+ PP V F T +HPNVD G CL I+ + W V++++ SL+ EP+ + P
Sbjct: 61 YPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINEPEPSHP 120
Query: 91 FK 86
+
Sbjct: 121 IR 122
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -1
Query: 361 NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDI 182
NLF W I G +T++ G Y++ + F + +P PP KF P FHPNV G +CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 181 LKDK--WTALYDVRTVLLSIQSLLAEPKYTKP 92
L + W ++ +L+ IQ LL P P
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDP 128
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -1
Query: 361 NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDI 182
NLF W I G +T++ G Y++ + F + +P PP KF P FHPNV G +CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 181 LKDK--WTALYDVRTVLLSIQSLLAEPKYTKP 92
L + W ++ +L+ IQ LL P P
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDP 128
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 70.9 bits (166), Expect = 8e-13
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Frame = -1
Query: 445 AVSKRLQKELMELMRCSDKG--ISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPN 272
A ++RL KEL +L + +G + S +L +W + G T+YAG + L F
Sbjct: 4 AATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGP 63
Query: 271 SYPYAPPVVKFM--TPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYT 98
YP+ P V F+ T HP++ + G ICL IL D WT V++V LSI S+L+ K
Sbjct: 64 QYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSILSMLSSSKEK 123
Query: 97 K 95
K
Sbjct: 124 K 124
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = -1
Query: 352 KWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLICLDILK 176
++I +GP +T Y +++ ++ P+ YP+ P + F+ FHPN+D G +CLD++
Sbjct: 34 EFIVRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVIN 93
Query: 175 DKWTALYDVRTVL-LSIQSLLAEPKYTKP 92
WTALYD+ + + LL P P
Sbjct: 94 QAWTALYDLTNIFDTFLPQLLTYPNAADP 122
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -1
Query: 349 WIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDIL-KD 173
WI T+ GP + + G +Y++S+ F + +P PP+ +F TP HPNVD G I L +L ++
Sbjct: 71 WICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQE 129
Query: 172 KWTALYDVRTVLLSIQSLLAEPKYTK 95
W++ ++ +L I +LLA P T+
Sbjct: 130 HWSSETSLKKLLREISNLLATPDLTQ 155
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
+RLQK+ +LM+ GI A P +N+ +W + G +T + G Y + F ++P++
Sbjct: 22 RRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWS 81
Query: 256 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAE 110
PP + +TP F N C L D + W + V +L+ + S + E
Sbjct: 82 PPAITMITPNGRFQTNTRLC-LSISDYHPESWNPGWTVSAILIGLHSFMNE 131
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 57.6 bits (133), Expect = 8e-09
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
+RL KE MEL + ++ A P +NLF+W TI G L T + G Y + FP YP
Sbjct: 13 RRLMKEAMELRQPTEM-YHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMK 71
Query: 256 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLL 116
PP + +TP F N C L + W + +RT LL++ L
Sbjct: 72 PPNLILLTPNGRFELNKKVC-LSISGYHPETWLPSWSIRTALLALIGFL 119
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 56.0 bits (129), Expect = 2e-08
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Frame = -1
Query: 433 RLQKELMELMRCSDKGISAFPESENL-----FKWIGTINGPLETVYAGHKYKLSLEFPNS 269
R++KE+ +L + + I F + E FK IG +G L Y + L+L+
Sbjct: 17 RIRKEIADLAKNKRRFIKDFRKIEKCKDIFQFKIIG--DGVL---YKNMIFTLTLDVNVE 71
Query: 268 YPYAPPVVKFMTPCFHPNVD--TCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYTK 95
YP+ PP +KF +HPNVD TC L +L++ W + VLL++ LL EP ++
Sbjct: 72 YPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDVLLNLIVLLNEPDLSR 131
Query: 94 P 92
P
Sbjct: 132 P 132
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 56.0 bits (129), Expect = 2e-08
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 257
+RL+K+ L++ + A P N+ +W I G +T Y G Y L FP +P+
Sbjct: 11 QRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFK 70
Query: 256 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPKYT 98
PP + +TP F N C L D D W + V T++ + S + + + T
Sbjct: 71 PPAILMLTPNGRFQTNTRLC-LSISDYHPDTWNPAWTVSTIITGLMSFMNDNQPT 124
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = -1
Query: 343 GTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTC-GLICL-DILKDK 170
G I G ET Y G ++L ++ SYP+ P VKF+T +HP+V G ICL D+
Sbjct: 383 GIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV 442
Query: 169 WTALYDVRTVLLSIQSLLAEPKYTKP 92
W + VL+ IQS ++ +P
Sbjct: 443 WPVSMTIYKVLIVIQSWMSNFNEKEP 468
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = -1
Query: 328 PLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILK 176
P E +Y G K++ + P Y PPVVK +T +HPN++ G ICL IL+
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILR 117
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Frame = -1
Query: 337 INGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTP-----CFHPNVDTCGLICLDIL-- 179
I+GP +T YA ++ + FP YP++PP F+T F+PN+ G ICL IL
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 178 -----KDKWTALYDVRTVLLSIQSLLAEPKYTK 95
++KW + VL+SIQ ++ + + K
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSIQEVIEKHLWLK 541
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 41.5 bits (93), Expect = 5e-04
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = -1
Query: 358 LFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLI---C 191
L +W +I GP T Y Y L ++ +YP PP V+F T V+ + G+I
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRN 97
Query: 190 LDILKDKWTALYDVRTVLLSIQ 125
L L++ W+ Y ++TVL I+
Sbjct: 98 LTTLRN-WSNSYMIKTVLEDIR 118
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 337 INGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMT 233
I GP +T Y +++ L FP++YP A P +KF T
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQT 69
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -1
Query: 436 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSL 284
KR+QKEL +L R S ++L+ W TI GP E+ Y G + L++
Sbjct: 4 KRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 225 KHGVINLTTGGAYGYEFGNSS 287
K G T GG+YGY +GNSS
Sbjct: 198 KTGDTGKTPGGSYGYGYGNSS 218
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 225 KHGVINLTTGGAYGYEFGNSS 287
K G T GG+YGY +GNSS
Sbjct: 208 KTGDTGKTPGGSYGYGYGNSS 228
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 225 KHGVINLTTGGAYGYEFGNSS 287
K G T GG+YGY +GNSS
Sbjct: 311 KTGDTGKTPGGSYGYGYGNSS 331
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 225 KHGVINLTTGGAYGYEFGNSS 287
K G T GG+YGY +GNSS
Sbjct: 279 KTGDTGKTPGGSYGYGYGNSS 299
>AL033514-31|CAA22092.1| 444|Caenorhabditis elegans Hypothetical
protein Y75B8A.32 protein.
Length = 444
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 312 TQATNTNYHLNFQIHTRTHHLLSN 241
T+ T+T HL+ Q+H H++++N
Sbjct: 171 TEITSTPVHLSMQVHQAPHNMMNN 194
>Z72513-2|CAA96670.1| 562|Caenorhabditis elegans Hypothetical
protein T04F3.3 protein.
Length = 562
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 229 CFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLA 113
CF +C L+ LDIL + TA +++ T + I +A
Sbjct: 271 CFDGFSRSCTLVALDILCQRLTASHEIGTPFVDILDTIA 309
>Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical
protein ZK455.2 protein.
Length = 1118
Score = 27.5 bits (58), Expect = 9.3
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -1
Query: 388 GISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD 209
GIS ++E + W+ G LE + + KL F S +A VVK + +
Sbjct: 616 GISFNQQNEFIVMWVLCSRGSLEDILFNDELKLGRNFQVS--FAKDVVKGLNFLHTSPLL 673
Query: 208 TCGLICLD--ILKDKWT 164
G++CL ++ WT
Sbjct: 674 HHGMLCLQNCLVDSNWT 690
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 538 NIMAQNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMEL 407
N++A ++ A SS + I ++N A+ KRL+K ME+
Sbjct: 988 NLVALSVKDEVALSSGSEVEPLSDIDSEENLAIIKRLEKREMEI 1031
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical protein
C28A5.6 protein.
Length = 1061
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 538 NIMAQNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMEL 407
N++A ++ A SS + I ++N A+ KRL+K ME+
Sbjct: 988 NLVALSVKDEVALSSGSEVEPLSDIDSEENLAIIKRLEKREMEI 1031
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,336,760
Number of Sequences: 27780
Number of extensions: 324830
Number of successful extensions: 937
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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