Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_O19
(347 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF197345-1|AAF07212.1| 1013|Drosophila melanogaster prominin-lik... 29 1.2
AF127935-1|AAD22487.2| 1013|Drosophila melanogaster prominin-lik... 29 1.2
AE014296-563|AAN11531.1| 1013|Drosophila melanogaster CG7740-PC,... 29 1.2
AE014296-562|AAN11530.1| 1013|Drosophila melanogaster CG7740-PB,... 29 1.2
AE014296-561|AAF47716.2| 1013|Drosophila melanogaster CG7740-PA,... 29 1.2
AY118342-1|AAM48371.1| 686|Drosophila melanogaster LD46263p pro... 29 2.1
AE013599-1199|AAF58730.2| 686|Drosophila melanogaster CG12942-P... 29 2.1
AE013599-2855|AAF57579.1| 655|Drosophila melanogaster CG7461-PA... 28 2.8
BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p pro... 28 3.7
AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p pro... 28 3.7
AY121686-1|AAM52013.1| 946|Drosophila melanogaster RE37047p pro... 27 6.5
AE014297-1753|AAF54983.1| 776|Drosophila melanogaster CG14366-P... 27 6.5
AE014135-186|AAF59386.3| 946|Drosophila melanogaster CG11062-PA... 27 6.5
>AF197345-1|AAF07212.1| 1013|Drosophila melanogaster prominin-like
protein protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 244 CYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLF 110
CY C CC + P C + + + CC +C+ L+ +F
Sbjct: 186 CYCCFCCCRRCRQGCPPCTSKQDAQRRF--CCGICLLILIIGLIF 228
>AF127935-1|AAD22487.2| 1013|Drosophila melanogaster prominin-like
protein protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 244 CYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLF 110
CY C CC + P C + + + CC +C+ L+ +F
Sbjct: 186 CYCCFCCCRRCRQGCPPCTSKQDAQRRF--CCGICLLILIIGLIF 228
>AE014296-563|AAN11531.1| 1013|Drosophila melanogaster CG7740-PC,
isoform C protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 244 CYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLF 110
CY C CC + P C + + + CC +C+ L+ +F
Sbjct: 186 CYCCFCCCRRCRQGCPPCTSKQDAQRRF--CCGICLLILIIGLIF 228
>AE014296-562|AAN11530.1| 1013|Drosophila melanogaster CG7740-PB,
isoform B protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 244 CYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLF 110
CY C CC + P C + + + CC +C+ L+ +F
Sbjct: 186 CYCCFCCCRRCRQGCPPCTSKQDAQRRF--CCGICLLILIIGLIF 228
>AE014296-561|AAF47716.2| 1013|Drosophila melanogaster CG7740-PA,
isoform A protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 244 CYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLF 110
CY C CC + P C + + + CC +C+ L+ +F
Sbjct: 186 CYCCFCCCRRCRQGCPPCTSKQDAQRRF--CCGICLLILIIGLIF 228
>AY118342-1|AAM48371.1| 686|Drosophila melanogaster LD46263p
protein.
Length = 686
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/63 (25%), Positives = 24/63 (38%)
Frame = -2
Query: 286 RVHFNQHVQISAVRCYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLFC 107
RVH + +S Y+C C K F H+ C+ C C + + +
Sbjct: 404 RVHTPVQIAVSPTESYACTACDKVFNQKASLHSHQRFCQVKDVVHCSFCDQQFNSMRKYE 463
Query: 106 LHL 98
LHL
Sbjct: 464 LHL 466
>AE013599-1199|AAF58730.2| 686|Drosophila melanogaster CG12942-PA
protein.
Length = 686
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/63 (25%), Positives = 24/63 (38%)
Frame = -2
Query: 286 RVHFNQHVQISAVRCYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLFC 107
RVH + +S Y+C C K F H+ C+ C C + + +
Sbjct: 404 RVHTPVQIAVSPTESYACTACDKVFNQKASLHSHQRFCQVKDVVHCSFCDQQFNSMRKYE 463
Query: 106 LHL 98
LHL
Sbjct: 464 LHL 466
>AE013599-2855|AAF57579.1| 655|Drosophila melanogaster CG7461-PA
protein.
Length = 655
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 111 NSQEVSRRNMQSTQQVKYMQRQLGRCRQLGTHTPK 215
N + + R +QST +Y+ CRQ+ TH+PK
Sbjct: 25 NFETMWRHTIQST---RYLAGNASLCRQIATHSPK 56
>BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p
protein.
Length = 1455
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Frame = -2
Query: 280 HFNQHVQISAVRCYSCVCCRKAF----GV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWL 113
H N H Q S +R Y C C F + +C HR C LC L +
Sbjct: 462 HLNTHCQ-SKIRRYRCRKCSGRFMWPENLQRHACSHREEKTIASQILCSLCDISLSSLSQ 520
Query: 112 FCLHLLGPXHXLRAL 68
LHL+ H L +
Sbjct: 521 LRLHLITHQHDLNGI 535
>AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p
protein.
Length = 1454
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Frame = -2
Query: 280 HFNQHVQISAVRCYSCVCCRKAF----GV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWL 113
H N H Q S +R Y C C F + +C HR C LC L +
Sbjct: 461 HLNTHCQ-SKIRRYRCRKCSGRFMWPENLQRHACSHREEKTIASQILCSLCDISLSSLSQ 519
Query: 112 FCLHLLGPXHXLRAL 68
LHL+ H L +
Sbjct: 520 LRLHLITHQHDLNGI 534
>AY121686-1|AAM52013.1| 946|Drosophila melanogaster RE37047p
protein.
Length = 946
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = -2
Query: 280 HFNQHVQISAVRCY---SCVCCRKAFGV*VPSCLHRPSCRCIYFTCC 149
H RC+ C+CCR+ V V C C C CC
Sbjct: 9 HSQSGAPFKGSRCFFNCQCICCRQGCCVVVVKC-----CCCFNLNCC 50
>AE014297-1753|AAF54983.1| 776|Drosophila melanogaster CG14366-PA
protein.
Length = 776
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 93 PSRCRQNSQEVSRRNMQSTQQVKYMQRQLGRCRQLGTHTPK 215
P Q Q SRR M TQQ+ Y Q+Q R +Q P+
Sbjct: 551 PEHNEQQQQHPSRRLMSPTQQL-YQQQQHQRSQQQQQQQPQ 590
>AE014135-186|AAF59386.3| 946|Drosophila melanogaster CG11062-PA
protein.
Length = 946
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = -2
Query: 280 HFNQHVQISAVRCY---SCVCCRKAFGV*VPSCLHRPSCRCIYFTCC 149
H RC+ C+CCR+ V V C C C CC
Sbjct: 9 HSQSGAPFKGSRCFFNCQCICCRQGCCVVVVKC-----CCCFNLNCC 50
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,564,095
Number of Sequences: 53049
Number of extensions: 199595
Number of successful extensions: 630
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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