Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_O18
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC072401-1|AAH72401.1| 228|Homo sapiens ribulose-5-phosphate-3-... 248 1e-65
BC016764-1|AAH16764.1| 228|Homo sapiens ribulose-5-phosphate-3-... 248 1e-65
BC005148-1|AAH05148.2| 228|Homo sapiens ribulose-5-phosphate-3-... 248 1e-65
DQ120706-1|ABC40667.1| 228|Homo sapiens rcRPE protein. 231 1e-60
AJ224326-1|CAA11895.1| 174|Homo sapiens ribulose-5-phosphate-ep... 182 1e-45
AK056028-1|BAB71076.1| 178|Homo sapiens protein ( Homo sapiens ... 156 6e-38
AC007038-1|AAX93087.1| 178|Homo sapiens unknown protein. 156 6e-38
AK093658-1|BAC04212.1| 178|Homo sapiens protein ( Homo sapiens ... 152 1e-36
>BC072401-1|AAH72401.1| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 248 bits (607), Expect = 1e-65
Identities = 114/183 (62%), Positives = 142/183 (77%), Gaps = 1/183 (0%)
Frame = -3
Query: 669 NXDLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAFFETHMM 493
N DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D FF+ HMM
Sbjct: 13 NSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMM 72
Query: 492 VEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSEVEKYI 313
V KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPGT V + +
Sbjct: 73 VSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWA 132
Query: 312 SISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPSTINCCANAGAN 133
+ DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEVDGGVGP T++ CA AGAN
Sbjct: 133 NQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGAN 192
Query: 132 MIV 124
MIV
Sbjct: 193 MIV 195
>BC016764-1|AAH16764.1| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 248 bits (607), Expect = 1e-65
Identities = 114/183 (62%), Positives = 142/183 (77%), Gaps = 1/183 (0%)
Frame = -3
Query: 669 NXDLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAFFETHMM 493
N DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D FF+ HMM
Sbjct: 13 NSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMM 72
Query: 492 VEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSEVEKYI 313
V KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPGT V + +
Sbjct: 73 VSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWA 132
Query: 312 SISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPSTINCCANAGAN 133
+ DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEVDGGVGP T++ CA AGAN
Sbjct: 133 NQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGAN 192
Query: 132 MIV 124
MIV
Sbjct: 193 MIV 195
>BC005148-1|AAH05148.2| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 248 bits (607), Expect = 1e-65
Identities = 114/183 (62%), Positives = 142/183 (77%), Gaps = 1/183 (0%)
Frame = -3
Query: 669 NXDLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAFFETHMM 493
N DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D FF+ HMM
Sbjct: 13 NSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMM 72
Query: 492 VEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSEVEKYI 313
V KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPGT V + +
Sbjct: 73 VSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWA 132
Query: 312 SISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPSTINCCANAGAN 133
+ DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEVDGGVGP T++ CA AGAN
Sbjct: 133 NQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGAN 192
Query: 132 MIV 124
MIV
Sbjct: 193 MIV 195
>DQ120706-1|ABC40667.1| 228|Homo sapiens rcRPE protein.
Length = 228
Score = 231 bits (566), Expect = 1e-60
Identities = 108/183 (59%), Positives = 137/183 (74%), Gaps = 1/183 (0%)
Frame = -3
Query: 669 NXDLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAFFETHMM 493
N DL+ L + ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D FF+ HMM
Sbjct: 13 NSDLANLGAKCLQMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMM 72
Query: 492 VEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVSEVEKYI 313
V KPEQW+ PMA A NQYTFH+E ++ + + +RE+GMKVG+AIKPGT V + +
Sbjct: 73 VSKPEQWVKPMAVAEANQYTFHLEATENPGTLIKDIRENGMKVGLAIKPGTSVEYLAPWA 132
Query: 312 SISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPSTINCCANAGAN 133
+ DM L+MTVEPGFG QKFME+ M KV +LR +P LDIE DGGVG T++ CA AGAN
Sbjct: 133 NQIDMALVMTVEPGFGEQKFMEDMMPKVHWLRTQFPSLDIEGDGGVGSDTVHKCAEAGAN 192
Query: 132 MIV 124
M V
Sbjct: 193 MTV 195
>AJ224326-1|CAA11895.1| 174|Homo sapiens
ribulose-5-phosphate-epimerase protein.
Length = 174
Score = 182 bits (443), Expect = 1e-45
Identities = 82/133 (61%), Positives = 102/133 (76%)
Frame = -3
Query: 522 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPG 343
+D FF+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPG
Sbjct: 9 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 68
Query: 342 TPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGPST 163
T V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEVDGGVGP T
Sbjct: 69 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDT 128
Query: 162 INCCANAGANMIV 124
++ CA AGANMIV
Sbjct: 129 VHKCAEAGANMIV 141
>AK056028-1|BAB71076.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ31466 fis, clone NT2NE2001372, highly similar to
Homo sapiens mRNA for putative
ribulose-5-phosphate-epimerase. ).
Length = 178
Score = 156 bits (379), Expect = 6e-38
Identities = 79/144 (54%), Positives = 97/144 (67%), Gaps = 18/144 (12%)
Frame = -3
Query: 501 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMK--------------- 367
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMK
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 366 ---VGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD 196
VG+AIKPGT V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LD
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD 121
Query: 195 IEVDGGVGPSTINCCANAGANMIV 124
IEVDGGVGP T++ CA AGANMIV
Sbjct: 122 IEVDGGVGPDTVHKCAEAGANMIV 145
>AC007038-1|AAX93087.1| 178|Homo sapiens unknown protein.
Length = 178
Score = 156 bits (379), Expect = 6e-38
Identities = 79/144 (54%), Positives = 97/144 (67%), Gaps = 18/144 (12%)
Frame = -3
Query: 501 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMK--------------- 367
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMK
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 366 ---VGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD 196
VG+AIKPGT V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LD
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD 121
Query: 195 IEVDGGVGPSTINCCANAGANMIV 124
IEVDGGVGP T++ CA AGANMIV
Sbjct: 122 IEVDGGVGPDTVHKCAEAGANMIV 145
>AK093658-1|BAC04212.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ36339 fis, clone THYMU2006365, highly similar to
Homo sapiens mRNA for putative
ribulose-5-phosphate-epimerase. ).
Length = 178
Score = 152 bits (369), Expect = 1e-36
Identities = 78/144 (54%), Positives = 96/144 (66%), Gaps = 18/144 (12%)
Frame = -3
Query: 501 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMK--------------- 367
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMK
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 366 ---VGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD 196
VG+AIKPGT V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LD
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD 121
Query: 195 IEVDGGVGPSTINCCANAGANMIV 124
IEVDGGVG T++ CA AGANMIV
Sbjct: 122 IEVDGGVGLDTVHKCAEAGANMIV 145
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,336,633
Number of Sequences: 237096
Number of extensions: 2127088
Number of successful extensions: 3807
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3800
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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