Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_O11
         (725 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   6.8  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   9.0  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 67  MTYDVMICRSKLSNFCNISI 8
           +++DV+ C + + N C IS+
Sbjct: 118 VSFDVLSCTASILNLCMISV 137


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 82  IMKSKMTYDVMICRSKLSNFCNISI 8
           + K  +T DV+ C + + N C I++
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIAL 132


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 82  IMKSKMTYDVMICRSKLSNFCNISI 8
           + K  +T DV+ C + + N C I++
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIAL 132


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 82  IMKSKMTYDVMICRSKLSNFCNISI 8
           + K  +T DV+ C + + N C I++
Sbjct: 108 LCKLWLTCDVLCCTASILNLCAIAL 132


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -2

Query: 73  SKMTYDVMICRSKLSNFCNISI 8
           S ++ D+++C + + + C ISI
Sbjct: 113 SWVSLDILLCTASILSLCAISI 134


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = -1

Query: 245 TRPLLAANTLTRAPLPTREINCSIYV*NYPM*VRVAFSTPRWITVYFLDL 96
           T PLL    L    L T  +  +I V N      V     RW+ V F+ +
Sbjct: 295 TVPLLGKYLLFTMVLVTLSVVVTIAVLNVNFRSPVTHRMARWVRVVFIQV 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,276
Number of Sequences: 438
Number of extensions: 2497
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)