Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_O07
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071161-1|AAL48783.1|   89|Drosophila melanogaster RE19842p pro...   114   9e-26
AE014296-811|AAF47874.1|   85|Drosophila melanogaster CG1268-PA ...   114   1e-25
AE014296-3571|AAF51743.2|   89|Drosophila melanogaster CG7625-PA...   113   2e-25
AY069473-1|AAL39618.1|   84|Drosophila melanogaster LD21410p pro...    87   2e-17
AE014296-786|AAF47856.1|   84|Drosophila melanogaster CG11589-PA...    87   2e-17
AE014297-2275|AAF55365.1|   88|Drosophila melanogaster CG14909-P...    55   7e-08
U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein.         28   9.6  

>AY071161-1|AAL48783.1|   89|Drosophila melanogaster RE19842p
           protein.
          Length = 89

 Score =  114 bits (275), Expect = 9e-26
 Identities = 50/81 (61%), Positives = 62/81 (76%)
 Frame = -2

Query: 618 PIFVFSILWGVVGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRL 439
           PI + SI W  +GIICP FA +GPNRG+ Q  LILTAATCWLFWLC YM Q+NPLIGP+L
Sbjct: 8   PIVITSI-WAFIGIICPFFA-RGPNRGVTQCCLILTAATCWLFWLCCYMTQLNPLIGPKL 65

Query: 438 SNETLIWISRTWGNKINNTQA 376
           S   ++ ++R WGN+I +T A
Sbjct: 66  SMNEIMIMAREWGNEIKDTMA 86


>AE014296-811|AAF47874.1|   85|Drosophila melanogaster CG1268-PA
           protein.
          Length = 85

 Score =  114 bits (274), Expect = 1e-25
 Identities = 46/82 (56%), Positives = 59/82 (71%)
 Frame = -2

Query: 636 MGYSLIPIFVFSILWGVVGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNP 457
           MG +  P+  F+ LWG VGI  PI  PKGP++ +I+ +L+LTAA CWLFWLC YMAQMNP
Sbjct: 1   MGAAFFPVLFFTALWGGVGIAMPIMTPKGPHQNLIRCILMLTAACCWLFWLCCYMAQMNP 60

Query: 456 LIGPRLSNETLIWISRTWGNKI 391
           LIGP+L  + +  I R+W N I
Sbjct: 61  LIGPKLKRDVVAMIGRSWNNPI 82


>AE014296-3571|AAF51743.2|   89|Drosophila melanogaster CG7625-PA
           protein.
          Length = 89

 Score =  113 bits (272), Expect = 2e-25
 Identities = 49/81 (60%), Positives = 62/81 (76%)
 Frame = -2

Query: 618 PIFVFSILWGVVGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRL 439
           PI + SI W  +GIICP FA +GPNRG+ Q  L+LTAATCWLFWLC YM Q+NPLIGP+L
Sbjct: 8   PIVITSI-WAFIGIICPFFA-RGPNRGVTQCCLMLTAATCWLFWLCCYMTQLNPLIGPKL 65

Query: 438 SNETLIWISRTWGNKINNTQA 376
           S   ++ ++R WGN+I +T A
Sbjct: 66  SMNEIMIMAREWGNEIKDTMA 86


>AY069473-1|AAL39618.1|   84|Drosophila melanogaster LD21410p
           protein.
          Length = 84

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 34/77 (44%), Positives = 50/77 (64%)
 Frame = -2

Query: 621 IPIFVFSILWGVVGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPR 442
           + I  F+I W  V    PI   K P+  +++ + +LTA  CWLFWLC Y+AQ+NPL+GP+
Sbjct: 5   LTIVFFTIFWAAVAKYGPILFTKQPHDDLVRCIFLLTAVVCWLFWLCCYLAQLNPLLGPK 64

Query: 441 LSNETLIWISRTWGNKI 391
           L+  T+  I+ +WGN I
Sbjct: 65  LNGNTIRIIASSWGNPI 81


>AE014296-786|AAF47856.1|   84|Drosophila melanogaster CG11589-PA
           protein.
          Length = 84

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 34/77 (44%), Positives = 50/77 (64%)
 Frame = -2

Query: 621 IPIFVFSILWGVVGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPR 442
           + I  F+I W  V    PI   K P+  +++ + +LTA  CWLFWLC Y+AQ+NPL+GP+
Sbjct: 5   LTIVFFTIFWAAVAKYGPILFTKQPHDDLVRCIFLLTAVVCWLFWLCCYLAQLNPLLGPK 64

Query: 441 LSNETLIWISRTWGNKI 391
           L+  T+  I+ +WGN I
Sbjct: 65  LNGNTIRIIASSWGNPI 81


>AE014297-2275|AAF55365.1|   88|Drosophila melanogaster CG14909-PA
           protein.
          Length = 88

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 23/77 (29%), Positives = 42/77 (54%)
 Frame = -2

Query: 621 IPIFVFSILWGVVGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPR 442
           +   V ++ W +  II  + + +   RG+I+  +ILTA  C+L W+  ++ Q+NPL GPR
Sbjct: 5   VAFMVITVFWLLFAIIGFLVSYRYEERGLIRCCVILTAVCCYLAWMVTFVMQLNPLTGPR 64

Query: 441 LSNETLIWISRTWGNKI 391
              + ++ +   W   I
Sbjct: 65  AKQKIILGMITYWPRSI 81


>U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein.
          Length = 1231

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -2

Query: 252 CNICRILV--YLYSSKINKVEYSMMHR*SVFVANFYNLCRGTVISNFDCSNN 103
           C+I R+L    + S  + K+ Y+ MH   + +  F +    TV+  FD  +N
Sbjct: 8   CHIMRLLATQVVASDFVQKIAYNKMHIKQIIIQGFKSYKDQTVVEPFDKRHN 59


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,464,033
Number of Sequences: 53049
Number of extensions: 594645
Number of successful extensions: 1306
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)