Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_O03
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0092 + 19655747-19655825,19656362-19656567,19656990-196570... 54 1e-07
08_02_0711 + 20305341-20305859,20306278-20306448,20306995-203070... 53 2e-07
12_01_0343 + 2640822-2641106,2641488-2641556,2641708-2641887,264... 52 4e-07
04_03_0863 + 20397161-20397239,20397464-20397672,20397768-203978... 52 6e-07
09_04_0371 - 17020539-17020607,17020697-17020747,17020888-170210... 49 4e-06
08_02_0970 - 23140109-23140192,23140604-23140657,23140783-231407... 48 6e-06
08_02_0710 + 20275834-20276352,20276970-20277140,20277692-202777... 47 1e-05
11_01_0330 + 2472195-2472743 46 2e-05
08_02_0967 - 23110154-23110240,23110620-23110673,23111010-231111... 45 5e-05
08_02_0714 + 20343864-20344385,20344928-20345098,20345933-203459... 43 2e-04
03_02_0303 - 7261340-7261807 31 1.2
03_05_0807 + 27849637-27849823,27850002-27850294,27850736-278509... 30 1.6
03_01_0317 + 2492030-2492591,2493189-2493249,2493951-2494066,249... 30 2.2
10_01_0253 + 2661264-2661872,2662055-2662875,2662959-2663340 28 6.6
01_06_1391 + 36992276-36992476,36992609-36992794,36993215-369933... 28 6.6
02_02_0082 + 6615408-6615606,6615736-6615866,6615957-6616072,661... 28 8.7
>02_04_0092 +
19655747-19655825,19656362-19656567,19656990-19657096,
19657189-19657291,19657699-19657881,19657972-19658094
Length = 266
Score = 54.0 bits (124), Expect = 1e-07
Identities = 45/151 (29%), Positives = 69/151 (45%)
Frame = -3
Query: 721 SEHTLXDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNL 542
SEHT+ R +E+H++H + T A+ + G F +Q+ + KL + ++
Sbjct: 123 SEHTINGQRFAVELHMVHHSDDGNITVIAVLYRHGKPD-PFLFQIKD---KLAALYLEGC 178
Query: 541 TAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVF 362
A + + L + + G D R++ Y GSLTTPPC E V W IF + I
Sbjct: 179 KAEKGEPLPVGL---VDMRELKKGAD--RYFRYVGSLTTPPCTENVIWNIFGE---IREM 230
Query: 361 QMDNFRGLLSNLNLPLVDNFRQLQPLFGRRV 269
+ L + L+ N R QPL GR V
Sbjct: 231 TKEQAAALRAPLHGSYRHNRRPTQPLNGRTV 261
>08_02_0711 +
20305341-20305859,20306278-20306448,20306995-20307048,
20307389-20307475
Length = 276
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Frame = -3
Query: 721 SEHTLXDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNL 542
SEHT+ R +E+H++H N + N A V+ Y + + L + +
Sbjct: 130 SEHTIDGRRYDMELHMVHLNAQ--NQA---------AVIGILYTIGTTPDEFLQKMEPYI 178
Query: 541 TAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVF 362
AI N ++ + ++ G DT +Y Y GS TTPPC E V W + +S+
Sbjct: 179 IAISNQEGKEKMVVGGADPNVAKGKDTV-YYRYMGSFTTPPCTEGVIWTVVRKVHTVSLS 237
Query: 361 QMDNFRG--LLSNLN--LPLVD-NFRQLQPLF 281
Q+ + L+ N N PL D N R++ F
Sbjct: 238 QITLLKAAVLMGNENNARPLQDVNNREIDLFF 269
>12_01_0343 +
2640822-2641106,2641488-2641556,2641708-2641887,
2642015-2642081,2643237-2644015
Length = 459
Score = 52.4 bits (120), Expect = 4e-07
Identities = 51/155 (32%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Frame = -3
Query: 721 SEHTLXDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLS--PIVK 548
SEHT+ R PLE+H++H++ GL V++ Y++ D+ L +
Sbjct: 305 SEHTINGRRFPLELHLVHKSDA----------DGGLAVISVLYKLGAPDSFYLQFKDHLA 354
Query: 547 NLTAIENFNSTLQLPHTFSLSSILS-GLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPI 371
L A E S + L + S T ++ Y GSLTTPPC E V W + I
Sbjct: 355 ELGADECDFSKEEAHVAAGLVQMRSLQKRTGSYFRYGGSLTTPPCGENVVWSVLGKVREI 414
Query: 370 SVFQMDNFRGLLSNLNLPLVDNFRQLQPLFGRRVF 266
S Q+ LL + LP D R QPL GR VF
Sbjct: 415 SQEQLH----LLMS-PLPTKD-ARPAQPLNGRAVF 443
>04_03_0863 +
20397161-20397239,20397464-20397672,20397768-20397874,
20397996-20398098,20398236-20398412,20398549-20398704
Length = 276
Score = 51.6 bits (118), Expect = 6e-07
Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = -3
Query: 721 SEHTLXDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNL 542
SEHT+ R PLE+H++H N+ + VLAF Y+ D + L
Sbjct: 124 SEHTINGFRFPLELHMVHTNEN-----------GNITVLAFLYRFGRPDPFFEQDKLAAL 172
Query: 541 TAIENFNSTLQLP-HTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVI 392
A E + P S+S + +Y Y GSLTTPPCAE V W I
Sbjct: 173 NA-EGCKAEKGSPVPAGSVSLLTMRQHVHIYYRYVGSLTTPPCAENVIWNI 222
>09_04_0371 -
17020539-17020607,17020697-17020747,17020888-17021058,
17023296-17023404,17023570-17023676,17024429-17024640,
17024805-17024952
Length = 288
Score = 48.8 bits (111), Expect = 4e-06
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 1/152 (0%)
Frame = -3
Query: 721 SEHTLXDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNL 542
SEHT+ R EMH++H + ++ L A V + ++P KNL
Sbjct: 148 SEHTINGTRFDAEMHMVHEDPSMARAVVSVL----LSTKAGQPNAVLTE---MAPHFKNL 200
Query: 541 TAIENFNSTLQLPHTFSLSSILSGLD-TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISV 365
E ++ P S + +D T +Y Y GSLTTPPC E V W I S S
Sbjct: 201 AGKEKAEEEVKEPVDPS-----TWVDKTSGYYRYDGSLTTPPCTEGVIWTIMSKIGDASK 255
Query: 364 FQMDNFRGLLSNLNLPLVDNFRQLQPLFGRRV 269
Q+D LL + + N R Q L R V
Sbjct: 256 EQID----LLKTVATTVEPNARPAQKLNDRIV 283
>08_02_0970 -
23140109-23140192,23140604-23140657,23140783-23140794,
23140842-23141009,23141371-23141473,23141574-23141680,
23143766-23143977,23144136-23144223
Length = 275
Score = 48.4 bits (110), Expect = 6e-06
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Frame = -3
Query: 721 SEHTLXDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLL--SPIVK 548
SEHT+ R +E+H++H + NTA V+ YQ+ D LL P ++
Sbjct: 128 SEHTVNGRRYDMELHLVHDDGN-SNTA----------VIGNLYQIGNPDPFLLMLEPFIR 176
Query: 547 NLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYL--- 377
+ ++ + + + + L+ +Y Y GSLTTPPC E V W +F
Sbjct: 177 RIADTKDKSEPIGV-----VDPQLAKSPDAVYYRYMGSLTTPPCTEGVIWTVFKRVFLLA 231
Query: 376 -PISVFQMDNFRGLLSNLNLPLVDNFRQLQPLFGRRVFVRI 257
++ +Q+D R +++ +N R LQ + R + + I
Sbjct: 232 QTVAQYQLDLLREAVAD---GYENNARPLQKVNNRNISIFI 269
>08_02_0710 +
20275834-20276352,20276970-20277140,20277692-20277745,
20277848-20277934
Length = 276
Score = 47.2 bits (107), Expect = 1e-05
Identities = 39/151 (25%), Positives = 65/151 (43%)
Frame = -3
Query: 721 SEHTLXDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNL 542
SEHT+ R +E+H++H N + N A V+ Y + D + L + +
Sbjct: 131 SEHTIDGRRYDMELHMVHLNAQ--NQA---------AVIGILYTIGTRD-EFLQKLEPYI 178
Query: 541 TAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVF 362
I ++ + ++ G DT +Y Y GS TTPPC E V W + +S+
Sbjct: 179 IEISKQEGKERVIIGGADPNVAKGQDTV-YYRYMGSFTTPPCTEGVIWTVVRKVRTVSLS 237
Query: 361 QMDNFRGLLSNLNLPLVDNFRQLQPLFGRRV 269
Q+ + + N +N R LQ + R +
Sbjct: 238 QITLLKAAVLTGN---ENNARPLQGVNNREI 265
>11_01_0330 + 2472195-2472743
Length = 182
Score = 46.4 bits (105), Expect = 2e-05
Identities = 47/151 (31%), Positives = 66/151 (43%)
Frame = -3
Query: 721 SEHTLXDMRLPLEMHIIHRNKKYRNTAEAMQHPDGLCVLAFFYQVVEFDAKLLSPIVKNL 542
SEHT+ + PLE+ ++H A+ + G +F++Q+ A+L +
Sbjct: 32 SEHTINGEKHPLELQMVHAAADGSLAVIAILYKYG-APDSFYFQLKRKLAELAADGCS-- 88
Query: 541 TAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVF 362
EN L L H SL T ++ Y GSLT PPC E V W + IS
Sbjct: 89 FGEENAQVALGLVHLRSLQK-----RTGSYFRYAGSLTAPPCTEDVFWSVLGKIRQISQE 143
Query: 361 QMDNFRGLLSNLNLPLVDNFRQLQPLFGRRV 269
Q+ L++ L LP R QPL GR V
Sbjct: 144 QV----ALITAL-LP-AGGARPTQPLNGRTV 168
>08_02_0967 -
23110154-23110240,23110620-23110673,23111010-23111177,
23111432-23111534,23111664-23111988,23112091-23112181
Length = 275
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = -3
Query: 454 FYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPLFGR 275
+Y Y GSLTTPPC + V W I +S +Q+D R + + + +N R LQ + R
Sbjct: 206 YYRYMGSLTTPPCTQGVVWTIVKRVRTVSRYQLDLLREAVHD---EMENNARPLQAVNNR 262
Query: 274 RVFV 263
+ +
Sbjct: 263 DISI 266
>08_02_0714 +
20343864-20344385,20344928-20345098,20345933-20345986,
20346300-20346386
Length = 277
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = -3
Query: 454 FYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPLFGR 275
+Y Y GSLTTPPC E V W I +S+ Q+ + + N N N R LQ + R
Sbjct: 208 YYRYMGSLTTPPCTEGVIWTIVRKVHTVSLSQLALLKAAVVNGN---EKNARPLQDVNNR 264
Query: 274 RV 269
+
Sbjct: 265 NI 266
>03_02_0303 - 7261340-7261807
Length = 155
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 279 VAVSSSESHQRTLSSRRPNSTTPNGTGLD 193
V V S ES +R L +RPN + NG G D
Sbjct: 24 VFVPSPESFRRVLKLQRPNDSATNGNGAD 52
>03_05_0807 +
27849637-27849823,27850002-27850294,27850736-27850973,
27851075-27851410,27851496-27851581,27851678-27851785,
27851878-27852185,27852265-27852528,27852610-27853381
Length = 863
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = -3
Query: 652 RNTAEAMQHPDGL-CVLAFFYQVVEFDAKLLS----PIVKNLTAIENFNSTLQLPHTFSL 488
R+T E P L F Q+VE ++K+L+ P++KN NF TL P+T
Sbjct: 786 RDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDN 845
Query: 487 SSILSGL 467
G+
Sbjct: 846 KGAAEGI 852
>03_01_0317 +
2492030-2492591,2493189-2493249,2493951-2494066,
2494662-2495176
Length = 417
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = -3
Query: 289 PLFGRRVFVRITSKNPKFKKT----KLHYSKWD 203
PL R+ F + +P+F +T LHYSKWD
Sbjct: 280 PLPHRKYFQTVLCNSPEFNRTVVNHDLHYSKWD 312
>10_01_0253 + 2661264-2661872,2662055-2662875,2662959-2663340
Length = 603
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 258 SHQRTLSSRRPNSTTPNGTGLDTRSPKMTSST 163
S TL+ R P + PNG G+ +P + T
Sbjct: 533 SSNETLAEREPKTEVPNGGGISAAAPLSSDET 564
>01_06_1391 +
36992276-36992476,36992609-36992794,36993215-36993327,
36993504-36993687,36993799-36993900
Length = 261
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 514 LQLPHTFSLSSILSGLDTERFYTYKGSLT 428
L LP++FS +LSG+ + FY + GS T
Sbjct: 73 LTLPYSFSQLGMLSGVLLQLFYGFMGSWT 101
>02_02_0082 +
6615408-6615606,6615736-6615866,6615957-6616072,
6617109-6617230,6617353-6617645,6617774-6617875,
6620437-6620865,6621026-6621775,6621915-6622109
Length = 778
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 620 WPMCARVLLSGCGIRCQALKSYREEPNGHREL 525
WP+ +L+ G+RC ALK RE P E+
Sbjct: 650 WPLVEAEMLAKLGLRCTALKC-RERPGLESEV 680
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,782,929
Number of Sequences: 37544
Number of extensions: 423544
Number of successful extensions: 999
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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