Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_O03
         (729 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   1.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.9  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   6.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.8  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.0  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 219 WSLVFLNLGFFDVILTKTRRPNN 287
           W  VFL +G F V+L  T   N+
Sbjct: 3   WQRVFLAVGLFGVLLLLTNADNS 25


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 449  VEPFSVQARQD*RQGESMRQLQSGVE 526
            VEP   QA    R+ E MR+   G+E
Sbjct: 1161 VEPTDKQANSKTRRQEMMREAGRGIE 1186


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/15 (53%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = +1

Query: 340 DHG-NYPFETRKWAG 381
           DH  NYPF+  +W G
Sbjct: 64  DHTKNYPFDVDQWRG 78


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 234 RRPNSTTPNGTGLDTRSPKMTSSTSM 157
           RRP        G+ ++SP +T S +M
Sbjct: 583 RRPQRACSTTGGVPSKSPTLTHSPTM 608


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 718 EHTLXDMRLPLEMHIIHRNKKY 653
           +H   D+ LPL++HI +  ++Y
Sbjct: 672 KHKDVDVTLPLDLHIQNAIREY 693


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 691 EDAYRXMCAP 720
           EDAYR +C P
Sbjct: 557 EDAYRYLCMP 566


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 213  PNGTGLDTRSPKMTSST 163
            P+G G+ T+  K+TSS+
Sbjct: 1123 PSGGGIYTKDTKITSSS 1139


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 691 EDAYRXMCAP 720
           EDAYR +C P
Sbjct: 557 EDAYRYLCMP 566


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,698
Number of Sequences: 438
Number of extensions: 4273
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)