BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_O02
(757 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578800-1|AAT07305.1| 379|Anopheles gambiae decapentaplegic pr... 24 5.8
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 7.7
>AY578800-1|AAT07305.1| 379|Anopheles gambiae decapentaplegic
protein.
Length = 379
Score = 23.8 bits (49), Expect = 5.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1
Query: 706 ACCLTLYSNSFSTIYQN*RTSLKILSYMD 620
ACC+ +S S +Y N + + + +Y D
Sbjct: 342 ACCVPTQLSSISMLYLNEQNKVVLKNYQD 370
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 23.4 bits (48), Expect = 7.7
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 382 IVNTPLIVCIPRNHKSAISFQCSL*LMDTTKAVGSFDSSTL 504
++ P V HKSA S CSL ++T A +L
Sbjct: 111 LIPRPAEVPTTPEHKSAASSSCSLSTLETQTATAGASVQSL 151
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,314
Number of Sequences: 2352
Number of extensions: 15518
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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