Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_N24
         (647 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0031 - 187798-187887,187996-188179,188468-188640,188917-18...    29   3.2  
02_05_0716 - 31177877-31177943,31178028-31178104,31178396-311785...    28   5.6  
01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,380...    28   5.6  
06_01_0895 + 6877386-6878475,6878577-6878838,6878932-6879017,687...    28   7.4  
05_04_0165 - 18660021-18660130,18660553-18661045,18662860-18662994     28   7.4  
03_05_0600 + 26021863-26022469,26022562-26022992                       27   9.7  

>02_01_0031 -
           187798-187887,187996-188179,188468-188640,188917-189399,
           189557-190213,190821-190837,191501-192041
          Length = 714

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 171 GRERIASLHGYAPPFCLLLPRTSYGYL 251
           GR + ASL    PP CL+LP TS+  L
Sbjct: 154 GRMKQASLPRTFPPSCLILPITSFSIL 180


>02_05_0716 -
           31177877-31177943,31178028-31178104,31178396-31178553,
           31178647-31178732,31178847-31180303
          Length = 614

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 442 GLQYNTICFGWSYIMPFIKIISIS 371
           GL ++ +CF W++ MP I + SIS
Sbjct: 477 GLIWSLVCFRWNFEMPAIVLKSIS 500


>01_01_0517 +
           3803740-3806106,3806226-3806312,3806397-3807035,
           3807118-3807282,3807363-3807657,3807739-3807953,
           3808125-3808430,3808539-3808602,3808735-3808974,
           3809150-3809253
          Length = 1493

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -2

Query: 415 GWSYIMPFI-KIISISKHDTSWLELYIY 335
           GW   M F+ KII + K +T+WL+ Y+Y
Sbjct: 503 GWE--MKFLSKIIDLRKTETNWLKKYLY 528


>06_01_0895 +
           6877386-6878475,6878577-6878838,6878932-6879017,
           6879117-6879274,6879554-6879630,6879719-6879785
          Length = 579

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 442 GLQYNTICFGWSYIMPFIKIISIS 371
           GL ++ +CF W++ MP I + SIS
Sbjct: 442 GLIWSLVCFRWNFEMPAIILKSIS 465


>05_04_0165 - 18660021-18660130,18660553-18661045,18662860-18662994
          Length = 245

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = +1

Query: 421 RWCCTAVRVVIKAGIGTSTSPWTARHATRELVNAPSVYSLWSVVDGVVG 567
           RW C A       G     S W  R A+R  V+       W+ VDG +G
Sbjct: 22  RWGCGA-----GGGRDRDVSCWLERVASRPTVHTEKAGGAWAEVDGAIG 65


>03_05_0600 + 26021863-26022469,26022562-26022992
          Length = 345

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 513 ELAGRVSSGPRARRRANTRLDNHPDCSTTPSVLVG 409
           E     SSG   R+R    LDN P   +TP    G
Sbjct: 203 EATANCSSGSPERKRRRPSLDNEPPGGSTPPATTG 237


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,774,825
Number of Sequences: 37544
Number of extensions: 372431
Number of successful extensions: 883
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)