Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_N24
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin ...    29   7.2  
L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin ...    29   7.2  
L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin ...    29   7.2  
AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB...    29   7.2  
AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD...    29   7.2  
AE014297-3889|AAN14067.2| 2746|Drosophila melanogaster CG8318-PC...    29   7.2  

>L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin
           protein.
          Length = 2764

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 297 SHNLYFYNFQCSILQTGNHN*FVAVIGKMAVHTRASS-QYVLDQKNNNA 154
           SH    ++ +  I +  N   F+  +G + +H R+SS Q +L Q  NNA
Sbjct: 817 SHQSSEHDLEEQINEWANMTWFLLALGGVCLHKRSSSRQMLLQQSQNNA 865


>L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin
           protein.
          Length = 2802

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 297 SHNLYFYNFQCSILQTGNHN*FVAVIGKMAVHTRASS-QYVLDQKNNNA 154
           SH    ++ +  I +  N   F+  +G + +H R+SS Q +L Q  NNA
Sbjct: 817 SHQSSEHDLEEQINEWANMTWFLLALGGVCLHKRSSSRQMLLQQSQNNA 865


>L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin
           protein.
          Length = 2802

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 297 SHNLYFYNFQCSILQTGNHN*FVAVIGKMAVHTRASS-QYVLDQKNNNA 154
           SH    ++ +  I +  N   F+  +G + +H R+SS Q +L Q  NNA
Sbjct: 817 SHQSSEHDLEEQINEWANMTWFLLALGGVCLHKRSSSRQMLLQQSQNNA 865


>AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB,
           isoform B protein.
          Length = 2802

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 297 SHNLYFYNFQCSILQTGNHN*FVAVIGKMAVHTRASS-QYVLDQKNNNA 154
           SH    ++ +  I +  N   F+  +G + +H R+SS Q +L Q  NNA
Sbjct: 817 SHQSSEHDLEEQINEWANMTWFLLALGGVCLHKRSSSRQMLLQQSQNNA 865


>AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD,
           isoform D protein.
          Length = 2764

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 297 SHNLYFYNFQCSILQTGNHN*FVAVIGKMAVHTRASS-QYVLDQKNNNA 154
           SH    ++ +  I +  N   F+  +G + +H R+SS Q +L Q  NNA
Sbjct: 817 SHQSSEHDLEEQINEWANMTWFLLALGGVCLHKRSSSRQMLLQQSQNNA 865


>AE014297-3889|AAN14067.2| 2746|Drosophila melanogaster CG8318-PC,
           isoform C protein.
          Length = 2746

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 297 SHNLYFYNFQCSILQTGNHN*FVAVIGKMAVHTRASS-QYVLDQKNNNA 154
           SH    ++ +  I +  N   F+  +G + +H R+SS Q +L Q  NNA
Sbjct: 817 SHQSSEHDLEEQINEWANMTWFLLALGGVCLHKRSSSRQMLLQQSQNNA 865


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,670,150
Number of Sequences: 53049
Number of extensions: 634690
Number of successful extensions: 1698
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1698
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)