Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_N14
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical p...    37   0.017
Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical pr...    37   0.017
AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic catio...    37   0.017
Z66567-5|CAA91492.4|  757|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U23453-3|AAC46757.6|  297|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U23453-2|AAV58891.1|  464|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U23453-1|AAP86622.1|  484|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical
           protein F52F12.1a protein.
          Length = 585

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 17/30 (56%), Positives = 18/30 (60%)
 Frame = -2

Query: 725 GXLMLLTPETLRVKLPDTIEQAENISKKPQ 636
           G L    PETL   LP TIE AEN  KKP+
Sbjct: 519 GILTFFLPETLGAPLPMTIEDAENFGKKPE 548


>Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical
           protein F52F12.1b protein.
          Length = 568

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 17/30 (56%), Positives = 18/30 (60%)
 Frame = -2

Query: 725 GXLMLLTPETLRVKLPDTIEQAENISKKPQ 636
           G L    PETL   LP TIE AEN  KKP+
Sbjct: 502 GILTFFLPETLGAPLPMTIEDAENFGKKPE 531


>AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic cation
           transporter 1 protein.
          Length = 568

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 17/30 (56%), Positives = 18/30 (60%)
 Frame = -2

Query: 725 GXLMLLTPETLRVKLPDTIEQAENISKKPQ 636
           G L    PETL   LP TIE AEN  KKP+
Sbjct: 502 GILTFFLPETLGAPLPMTIEDAENFGKKPE 531


>Z66567-5|CAA91492.4|  757|Caenorhabditis elegans Hypothetical
           protein ZK455.8a protein.
          Length = 757

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -2

Query: 725 GXLMLLTPETLRVKLPDTIEQAENISKKPQN--GTLNG 618
           G L+LL PET  + LPDTI  +  + K+     GTL+G
Sbjct: 677 GCLVLLLPETQGLPLPDTILDSVQMVKRNTKPCGTLSG 714


>U23453-3|AAC46757.6|  297|Caenorhabditis elegans Hypothetical
           protein B0252.3a protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -2

Query: 725 GXLMLLTPETLRVKLPDTIEQAENISKK 642
           G L L+ PETL  KLP TI  AE  S++
Sbjct: 260 GLLTLILPETLNTKLPSTI--AETASRR 285


>U23453-2|AAV58891.1|  464|Caenorhabditis elegans Hypothetical
           protein B0252.3c protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -2

Query: 725 GXLMLLTPETLRVKLPDTIEQAENISKK 642
           G L L+ PETL  KLP TI  AE  S++
Sbjct: 427 GLLTLILPETLNTKLPSTI--AETASRR 452


>U23453-1|AAP86622.1|  484|Caenorhabditis elegans Hypothetical
           protein B0252.3b protein.
          Length = 484

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -2

Query: 725 GXLMLLTPETLRVKLPDTIEQAENISKK 642
           G L L+ PETL  KLP TI  AE  S++
Sbjct: 447 GLLTLILPETLNTKLPSTI--AETASRR 472


>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
            T25C12.3 protein.
          Length = 2103

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 451  TAPSLVGRLHRSLLSRPQVTPNSANLSERSCEF 549
            T PS+ G+L+ ++LS  +   NS  L  R+C +
Sbjct: 1333 TKPSMEGKLNYAVLSSNRTITNSLPLGNRACTY 1365


>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
            T25C12.3 protein.
          Length = 2103

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 451  TAPSLVGRLHRSLLSRPQVTPNSANLSERSCEF 549
            T PS+ G+L+ ++LS  +   NS  L  R+C +
Sbjct: 1333 TKPSMEGKLNYAVLSSNRTITNSLPLGNRACTY 1365


>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
            T25C12.3 protein.
          Length = 2103

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 451  TAPSLVGRLHRSLLSRPQVTPNSANLSERSCEF 549
            T PS+ G+L+ ++LS  +   NS  L  R+C +
Sbjct: 1333 TKPSMEGKLNYAVLSSNRTITNSLPLGNRACTY 1365


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,021,215
Number of Sequences: 27780
Number of extensions: 219130
Number of successful extensions: 466
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)