Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_N01
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical pr...    33   0.25 
U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical pr...    31   0.78 
U70858-4|AAB09178.1|  294|Caenorhabditis elegans Serpentine rece...    31   1.0  
AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm rece...    31   1.0  
U41105-9|AAL38967.1|  111|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z75549-7|CAD60423.1|  306|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL032648-8|CAI46618.1|  365|Caenorhabditis elegans Hypothetical ...    29   5.5  
AL022288-4|CAA18365.1|  461|Caenorhabditis elegans Hypothetical ...    28   9.5  

>U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical
           protein T19A5.5 protein.
          Length = 511

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 400 FHTILFSNQHINII-QNKVYNYSHRLLLKSFKINSQFKTV 516
           F  IL  N H+    Q+++  YSHRLL K  KIN ++KT+
Sbjct: 440 FLKILSDNLHVYYFEQDRMSRYSHRLL-KILKINEKYKTI 478


>U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical
           protein C10A4.7 protein.
          Length = 192

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 200 KITMKYIANIFFKNLFINSSIIFF*LQMENKLNKIHYILI 319
           +I   ++    FKN+FINSSI+      +  +N +H I++
Sbjct: 83  RILFAFLLITIFKNIFINSSILLIVTNTDYYINTVHNIIM 122


>U70858-4|AAB09178.1|  294|Caenorhabditis elegans Serpentine
           receptor, class x protein33 protein.
          Length = 294

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 362 ILRYRVAIH*EVSFLSKYNEFCLIYFPFATKKI 264
           I+ Y ++IH    FLS  N F  ++FPF+ K I
Sbjct: 84  IVCYEISIH--THFLSSVNRFIAVFFPFSYKNI 114


>AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 66 protein.
          Length = 331

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
 Frame = +2

Query: 131 FICLLFNLHFHIYIFLG--SNALFIKITMKYIANIF--FKNL---FINSSIIFF*LQMEN 289
           F+  LF        F G  +N+LFI IT+KYI NI   +K +   F    ++F   +  +
Sbjct: 2   FMFKLFGFFTAFGFFSGCIANSLFIFITIKYIKNISVPYKRMIVVFAALGLMFSGFEAIS 61

Query: 290 KLNKIHY--ILIKMTPLNV-WPLDILKFYNGIDSCYTYVCFIQFFSQINILILYKIKC 454
           K    +Y   L+  +  N   P++I   +  + SC+    ++  FS I++L +Y+  C
Sbjct: 62  KPFTHNYNGTLLYFSATNFQLPINISNAFITVWSCF----YLTTFSFISVLFIYRYLC 115


>U41105-9|AAL38967.1|  111|Caenorhabditis elegans Hypothetical
           protein T02G5.14 protein.
          Length = 111

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +2

Query: 473 FS*NRSKLILNSKL*IFTNTTFYYLLHKLLLHSFDNIYRN 592
           FS N+ K IL S+L +F N  F      ++   FDNIYR+
Sbjct: 28  FSDNQRKYIL-SRLKLFNNCLFINFASFIVFAKFDNIYRS 66


>Z75549-7|CAD60423.1|  306|Caenorhabditis elegans Hypothetical
           protein T19C4.8 protein.
          Length = 306

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
 Frame = +3

Query: 378 IVVIHMFVSYNSFLKSTY*YYTK*SVQL*SPASLEIVQN*FSIQNCKYLQ--IQRFIIYY 551
           I ++  FV+Y+ FL  TY  Y   + +  S AS   +++ F+  +C  +   +   I  +
Sbjct: 136 IFIVPFFVTYHIFLYDTYFQYNAVADKF-SLASKYNIKDIFTTLSCFMVSCTVVTMISNF 194

Query: 552 INYYCIRSITFTEINLQ 602
           I+Y  IR+  F   NL+
Sbjct: 195 ISYLKIRTFPFKPKNLE 211


>AL032648-8|CAI46618.1|  365|Caenorhabditis elegans Hypothetical
           protein Y54G9A.10 protein.
          Length = 365

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +3

Query: 126 FNLFVYCLIYIFIFTFFWVQMPCLSKSQ*SISRIFFLRIYSL 251
           FNL V  L ++F F+FF++ +   + +  +I+ + + R Y+L
Sbjct: 185 FNLVVAYLFFLFYFSFFYMILITAAPNLVAITLLLYSRHYNL 226


>AL022288-4|CAA18365.1|  461|Caenorhabditis elegans Hypothetical
           protein ZK1025.7 protein.
          Length = 461

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 543 IYYINYYCIRSITFTEINLQKKTIFSRIL 629
           IY  NY  +RS+TFT+I    K IF+  L
Sbjct: 305 IYTNNYSGVRSLTFTDIFAPPKYIFNTSL 333


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,054,800
Number of Sequences: 27780
Number of extensions: 343772
Number of successful extensions: 800
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)