Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_M23
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 239 1e-63
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 215 4e-56
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 198 5e-51
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 53 2e-07
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 52 5e-07
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 52 7e-07
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 49 4e-06
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 35 0.082
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 35 0.082
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 1.0
04_04_1159 - 31352922-31353098,31354117-31354267,31354581-313548... 29 4.1
06_03_0694 + 23580116-23580316,23580699-23580701,23581682-235820... 28 7.1
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 239 bits (586), Expect = 1e-63
Identities = 114/201 (56%), Positives = 144/201 (71%)
Frame = -2
Query: 692 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 513
NPLFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 22 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 81
Query: 512 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXKRPNTIRSGTNTVTKLVE 333
K A LFK+L KYRPE +P ++ G N VT L+E
Sbjct: 82 KNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAK-KPIVVKYGLNHVTYLIE 140
Query: 332 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 153
+ KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+RLG++VH+KT + L LT V+
Sbjct: 141 QSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVK 200
Query: 152 SGDRASFSKVVEAIKTNFNER 90
+ D+ FSK++EAIK NFN++
Sbjct: 201 NEDKLEFSKILEAIKANFNDK 221
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -3
Query: 85 EELRKHWGGGVLGNKSNARIAKLRE 11
+E+RK WGGGV+G+KS A+ K RE
Sbjct: 223 DEVRKKWGGGVMGSKSQAK-TKARE 246
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 215 bits (524), Expect = 4e-56
Identities = 106/201 (52%), Positives = 141/201 (70%)
Frame = -2
Query: 692 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 513
NPLFEKRPK F IG + P +DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TLD
Sbjct: 23 NPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLD 82
Query: 512 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXKRPNTIRSGTNTVTKLVE 333
K ++L++ + E +P ++ G + VT L+E
Sbjct: 83 KNLGCQKERLLKRAQAEAEGKTVEAK-----------------KPIVVKYGLDHVTYLIE 125
Query: 332 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 153
+ KAQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG++VH+KT + L LT V+
Sbjct: 126 QSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVK 185
Query: 152 SGDRASFSKVVEAIKTNFNER 90
+ D+ FSK++EAIK+NFN++
Sbjct: 186 NEDKLEFSKILEAIKSNFNDK 206
Score = 34.7 bits (76), Expect = 0.082
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = -3
Query: 85 EELRKHWGGGVLGNKSNARIAKLRE 11
+E+RK WGGG++G+KS A+ K RE
Sbjct: 208 DEVRKKWGGGIMGSKSQAK-TKARE 231
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 198 bits (482), Expect = 5e-51
Identities = 103/201 (51%), Positives = 131/201 (65%)
Frame = -2
Query: 692 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 513
NPLFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 6 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 65
Query: 512 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXKRPNTIRSGTNTVTKLVE 333
K A LFK+L KYRPE K+P ++ G N VT L+E
Sbjct: 66 KNLATNLFKMLLKYRPE-DKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIE 124
Query: 332 KKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 153
+ KAQLVVIAHDVDPIELV++LPALCRKM +VH+KT + L LT V+
Sbjct: 125 QSKAQLVVIAHDVDPIELVVWLPALCRKM--------------EIVHKKTASVLCLTTVK 170
Query: 152 SGDRASFSKVVEAIKTNFNER 90
+ D+ FSK++EAIK NFN++
Sbjct: 171 NEDKLEFSKILEAIKANFNDK 191
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -3
Query: 85 EELRKHWGGGVLGNKSNARIAKLRE 11
+E+RK WGGGV+G+KS A+ K RE
Sbjct: 193 DEVRKKWGGGVMGSKSQAK-TKARE 216
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = -2
Query: 371 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 198
++ G N TK + + A+ VV+A D +P+E++L LP L VPY V K LG
Sbjct: 33 LKKGANEATKTLNRGIAEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 92
Query: 197 VHRKTCTCLALTNVESGDRASFSKVVEAIK 108
V R C +N S R + + AI+
Sbjct: 93 VTRPVIACSVTSNEASNLRDPINNLKVAIE 122
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -2
Query: 371 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GAL 198
++ G V K + + + L +IA ++ PI+++ +P LC + +PY V K L
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLATAGT 104
Query: 197 VHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 93
R TC L LT G+ V E +KT++++
Sbjct: 105 TKRPTCCVLVLTKPAKGELE--EDVKEKLKTDYDQ 137
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = -2
Query: 371 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 198
++ G N TK + + ++ VV+A D +P+E++L LP L VPY V K LG
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94
Query: 197 VHRKTCTCLALTNVESGDRASFSKVVEAIK 108
V R C +N S + + +AI+
Sbjct: 95 VTRPVIACSVTSNEGSQLKTPIQNLKDAIE 124
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/92 (26%), Positives = 43/92 (46%)
Frame = -2
Query: 371 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVH 192
++ G V K + + L VIA ++ PI+++ +P LC + +PY V K L
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLATAGT 104
Query: 191 RKTCTCLALTNVESGDRASFSKVVEAIKTNFN 96
K TC L + +V E +K++++
Sbjct: 105 TKRPTCCVLVMTKPAKGEINEEVKEKLKSDYD 136
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -2
Query: 362 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 204
G K +EK AQL V+A D D + V + ALC + V V LG
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -2
Query: 362 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 204
G K +EK AQL V+A D D + V + ALC + V V LG
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 594 PHPAPEGCTSASSESAPSDQP 532
P PAPE +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
>04_04_1159 -
31352922-31353098,31354117-31354267,31354581-31354812,
31354902-31355112,31355791-31355909,31355994-31356176,
31356283-31356481,31356636-31357015,31357127-31357191,
31357925-31357990,31358427-31358501,31358781-31358852,
31359318-31359386,31359476-31359547,31359658-31359729,
31360126-31360230,31360282-31360353,31361053-31361230,
31361707-31361791
Length = 860
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +3
Query: 573 SLLALDADILGPSYKSGQVPSWLNALTNGKVLWPL---LEXRIHDLLG-LNLFDHQWGGG 740
SL L+ + + SG++PS L+ LT K+LW +I D +G NL D ++ G
Sbjct: 164 SLFKLEELFIDSAGLSGELPSSLSKLTRMKILWASDNNFTGQIPDYIGSWNLTDLRFQGN 223
Query: 741 YF 746
F
Sbjct: 224 SF 225
>06_03_0694 +
23580116-23580316,23580699-23580701,23581682-23582065,
23582299-23582523
Length = 270
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 24 AMRALDLLPRTPPPQCLRSSSLALVEVRLDGFHDLRE 134
A ALDLL +TPPP ++S + E+ + F +L+E
Sbjct: 79 AAEALDLLEQTPPPSAGSAASQDVQEI-IGTFKNLKE 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,367,545
Number of Sequences: 37544
Number of extensions: 434043
Number of successful extensions: 1633
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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