Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_M19
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U67864-1|AAC47313.1|  415|Caenorhabditis elegans MEX-3 protein.        29   4.7  
AF003139-9|AAK73872.1|  415|Caenorhabditis elegans Muscle excess...    29   4.7  

>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 617  TRVEGCSETLCKVDPLPATTIPVRVFRLR 703
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631


>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
            ZK270.2d protein.
          Length = 4648

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 617  TRVEGCSETLCKVDPLPATTIPVRVFRLR 703
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620


>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 617  TRVEGCSETLCKVDPLPATTIPVRVFRLR 703
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620


>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
            ZK270.2e protein.
          Length = 4541

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 617  TRVEGCSETLCKVDPLPATTIPVRVFRLR 703
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631


>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
            ZK270.2d protein.
          Length = 4648

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 617  TRVEGCSETLCKVDPLPATTIPVRVFRLR 703
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620


>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
            ZK270.2a protein.
          Length = 4530

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 617  TRVEGCSETLCKVDPLPATTIPVRVFRLR 703
            TRV   SE   +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620


>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
           protein M18.5 protein.
          Length = 1134

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -1

Query: 681 GMVVAGSGSTLHRVSEHPSTLVYYICSLL 595
           G++V GS S L++ +++   +V Y CSLL
Sbjct: 223 GVIVLGSNSVLYKPNDNLGEVVPYTCSLL 251


>U67864-1|AAC47313.1|  415|Caenorhabditis elegans MEX-3 protein.
          Length = 415

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -1

Query: 750 THTTPVARAPSLYAHYLSLKTRT-GMVVAGSGSTLHRVSEHPSTLV 616
           T   P A AP     Y+ +  R  G+VV   G+T+ R+ +   T +
Sbjct: 125 TQVVPGAHAPGQITSYVRVPLRVVGLVVGPKGATIKRIQQDTHTYI 170


>AF003139-9|AAK73872.1|  415|Caenorhabditis elegans Muscle excess
           protein 3, isoform a protein.
          Length = 415

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -1

Query: 750 THTTPVARAPSLYAHYLSLKTRT-GMVVAGSGSTLHRVSEHPSTLV 616
           T   P A AP     Y+ +  R  G+VV   G+T+ R+ +   T +
Sbjct: 125 TQVVPGAHAPGQITSYVRVPLRVVGLVVGPKGATIKRIQQDTHTYI 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,285,773
Number of Sequences: 27780
Number of extensions: 331732
Number of successful extensions: 654
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)