Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_M17
(425 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 30 0.90
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250... 29 1.2
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 2.1
10_07_0044 + 12319382-12319532,12319978-12320163,12320247-123203... 28 3.6
08_01_0087 + 630355-630403,630502-630699,631858-631943,632238-63... 28 3.6
04_04_0158 - 23187070-23187264,23187347-23187477,23187550-231877... 28 3.6
03_05_0351 - 23382786-23382821,23383373-23383634,23384369-233856... 28 3.6
12_01_0042 + 337131-337612,338727-338898,338996-339204,339414-33... 27 4.8
11_01_0043 + 328272-328753,329233-329298,330082-330253,330357-33... 27 4.8
03_01_0381 - 2960533-2960805 27 4.8
02_05_0609 - 30335054-30335374,30335491-30335870,30336102-303364... 27 4.8
11_03_0127 - 10408628-10409106,10409188-10409821 27 6.3
02_03_0226 - 16591383-16592030,16592132-16592211,16592246-165929... 27 6.3
01_03_0043 - 11919597-11920364 27 6.3
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380... 27 8.3
10_08_0132 + 15087274-15087797,15089544-15089732,15090048-150901... 27 8.3
06_03_1377 - 29692895-29692899,29700435-29702190 27 8.3
02_05_0205 + 26755024-26756217 27 8.3
>02_05_0702 -
31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 29.9 bits (64), Expect = 0.90
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = -1
Query: 290 IVIADDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARK 111
+++ +GS V+ + Y+ E +++L EE +K T L + K V ++ EFAR+
Sbjct: 712 LMVLFEGSQEVS-RKAYEQVSERAKSLDEELTKLRTELLSLRSERDKAV---LEAEFARE 767
Query: 110 QLSNLTLTTEHR 75
+L+ T EH+
Sbjct: 768 RLNGFTAELEHQ 779
>09_01_0175 -
2509014-2509064,2509389-2509490,2509603-2509729,
2509852-2511564,2512335-2512424,2512533-2512801,
2513118-2513687,2513703-2514065
Length = 1094
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1
Query: 221 SRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTE 81
S+ E+ D TVLK D DE+ FN+M + R+ S L TE
Sbjct: 598 SKGSNEDIFIDPTVLKHMDRDELVAHFNKMMNQMKRQHDSTLQEKTE 644
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = -1
Query: 284 IADDGSTIVALH---QDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPE 123
I +DG+ + H +D + P + S A+ EET+++ +L D+V+ E++PE
Sbjct: 1115 IQNDGAELTKEHDGVKDEEIPDQSSGAIVEETAQEANLLASEPTDDVQ--VKELEPE 1169
>10_07_0044 +
12319382-12319532,12319978-12320163,12320247-12320396,
12320495-12320644,12320728-12321417,12321641-12322033,
12322073-12322546,12322634-12323974,12324042-12324388
Length = 1293
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 98 LTLTTEHRWDPRARDKKAKKTEMKRPDL 15
LT+T+ +WD R+ + +T RPDL
Sbjct: 852 LTMTSNPKWDEITRELEPGQTPQDRPDL 879
>08_01_0087 +
630355-630403,630502-630699,631858-631943,632238-632946,
633029-633194,633459-633934,634023-634873,635078-635987,
636597-636784
Length = 1210
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 98 LTLTTEHRWDPRARDKKAKKTEMKRPDL 15
LT+T+ +WD R+ + +T RPDL
Sbjct: 682 LTMTSNPKWDEITRELEPGQTPQDRPDL 709
>04_04_0158 -
23187070-23187264,23187347-23187477,23187550-23187763,
23187834-23187932,23188034-23188156,23188247-23188366,
23188447-23188506,23188592-23188884,23189554-23189707,
23189813-23190130,23190668-23190798,23191001-23191586,
23192125-23192739
Length = 1012
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1
Query: 311 LSRFYNKIVIADDGSTIVALH-QDYDFPYEHSRALPEETSKDNTVLKMTDLD 159
L R +VI GSTI+ DY +PY H R + + + + D D
Sbjct: 204 LERKTGGLVIWRSGSTIILYRGTDYKYPYFHDREMKNDMDESSEHTSSDDED 255
>03_05_0351 -
23382786-23382821,23383373-23383634,23384369-23385675,
23385776-23386290,23386379-23386741,23386916-23387284,
23387365-23388057,23388152-23388238,23388354-23388612
Length = 1296
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 98 LTLTTEHRWDPRARDKKAKKTEMKRPDL 15
LT+T+ +WD R+ + +T RPDL
Sbjct: 711 LTMTSNPKWDEITRELEPVQTPQDRPDL 738
>12_01_0042 +
337131-337612,338727-338898,338996-339204,339414-339572,
339914-340262
Length = 456
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 164 LDEVKRVFNEMKPEFARKQLSNLTLTTEHRWD 69
+D+ K +F ++P+ Q+ N+T +E+R D
Sbjct: 375 MDKAKEIFGTLEPKGIHVQILNITQLSEYRKD 406
>11_01_0043 +
328272-328753,329233-329298,330082-330253,330357-330565,
330779-330937,331279-331627
Length = 478
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 164 LDEVKRVFNEMKPEFARKQLSNLTLTTEHRWD 69
+D+ K +F ++P+ Q+ N+T +E+R D
Sbjct: 397 MDKAKEIFGTLEPKGIHVQILNITQLSEYRKD 428
>03_01_0381 - 2960533-2960805
Length = 90
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -1
Query: 152 KRVFNEMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
K + E + F + ++N+T T E +W + R +K + + ++
Sbjct: 27 KELEKEFERAFEQSDIANVTKTLEEKWAEQVRKRKLRIPQRRK 69
>02_05_0609 -
30335054-30335374,30335491-30335870,30336102-30336443,
30336551-30336700,30336781-30336878,30336986-30337045,
30337140-30337211,30337337-30337480,30337584-30337655,
30337767-30337899,30338076-30338181
Length = 625
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +2
Query: 296 CRIYLMPLLGLMLFCELNRTFYLYFKVNQVHSNSLKWYGINSF 424
C +L+P++GL+ + R + F V++ H+ ++ + F
Sbjct: 251 CISFLIPVMGLLFWWRHRRNHQILFDVDEQHTENVNLGNVKRF 293
>11_03_0127 - 10408628-10409106,10409188-10409821
Length = 370
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -1
Query: 266 TIVALHQDYDFPYEHSRALPEETSKD---NTVLKMTDLDEVKRVFNEMKPEFARKQLSNL 96
T V DY FP H LPE +D L+++ + + V E R++ SN
Sbjct: 45 TRVPSESDYRFPTRHRHDLPETAMQDAAREAFLRLSSIHRAELVSTEFAHHLFREE-SNS 103
Query: 95 TLTTE 81
T +
Sbjct: 104 VCTVQ 108
>02_03_0226 -
16591383-16592030,16592132-16592211,16592246-16592971,
16593060-16593192,16596839-16597518,16597604-16597666,
16597740-16597916,16598414-16598542,16598638-16598796,
16599057-16599224,16599418-16599519,16599812-16599857
Length = 1036
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 98 LTLTTEHRWDPRARDKKAKKTEMKRPDL 15
LT+T+ +WD R+ +T RPDL
Sbjct: 673 LTMTSNPKWDEITRELDPGQTPQDRPDL 700
>01_03_0043 - 11919597-11920364
Length = 255
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -1
Query: 359 KMSYLTRKIALIPRVALSRFYNKI-VIADDGSTIVALHQDYDFPYEHSRALPEETSKDNT 183
K+ Y T +++P +++ Y ++ VI +D + + D + + RALPE+ T
Sbjct: 114 KIQYET--FSMLPHESVNDMYGRLNVIVNDLKGLGVNYTDLEIAQKMLRALPEKYETLVT 171
Query: 182 VLKMTDLDEVK 150
+L +D+ +K
Sbjct: 172 MLINSDMSRMK 182
>10_08_0254 +
16236689-16236793,16237760-16237808,16237988-16238076,
16238178-16238234,16238684-16238746,16238828-16238893,
16239520-16239606,16239691-16239784,16240351-16240673,
16241022-16241048,16241065-16241145,16241445-16241476,
16242126-16242266,16242455-16242516,16243170-16243387
Length = 497
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 314 PLLGLMLFCELNRTFYLYFKVNQVHSNSLKWY 409
P LG++LF +L+ FY N HS L+ +
Sbjct: 307 PPLGMLLFIKLSDMFYYLRLFNHRHSRKLEQF 338
>10_08_0132 +
15087274-15087797,15089544-15089732,15090048-15090186,
15090454-15090594,15091420-15091569,15091908-15092011,
15092258-15092432,15092714-15092823,15092906-15093073,
15093180-15093345,15093771-15094049,15094445-15094543,
15094619-15094676,15095145-15095336,15095693-15095724,
15096023-15096117,15096321-15096426
Length = 908
Score = 26.6 bits (56), Expect = 8.3
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = -1
Query: 311 LSRFYNKIVIADDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEM 132
LS K + A+ G + +HQD + +PE T + + ++ ++ F+ M
Sbjct: 645 LSPIQLKHIQANAGHVPLCIHQDMKASMKRKTEVPEVTGSKSLTVIVSTAGNIEHDFDIM 704
Query: 131 KPEFARKQLSNL 96
K + LS +
Sbjct: 705 KLDLTANLLSKV 716
>06_03_1377 - 29692895-29692899,29700435-29702190
Length = 586
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -1
Query: 359 KMSYLTRKIALIPRVALSRFYNKI-VIADDGSTIVALHQDYDFPYEHSRALPEETSKDNT 183
K+ Y T +++P +++ Y ++ VI +D + A + D + + RALPE+ T
Sbjct: 114 KIQYET--FSMLPHESVNDMYGRLNVIVNDLKRLGANYTDLEVAQKMLRALPEKYETLVT 171
Query: 182 VLKMTDLDEV 153
+L +D+ +
Sbjct: 172 MLINSDMSRM 181
>02_05_0205 + 26755024-26756217
Length = 397
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 266 TIVALHQDYDFPYEHSRALPEETSKD 189
T V DY FP H R LPE +D
Sbjct: 45 TRVPSESDYRFPTRHRRDLPETAMQD 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,442,382
Number of Sequences: 37544
Number of extensions: 132395
Number of successful extensions: 372
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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