Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_M17
(425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68270-9|CAE54911.1| 307|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z68270-8|CAC35869.1| 309|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z68270-7|CAA92571.2| 109|Caenorhabditis elegans Hypothetical pr... 38 0.003
AF202930-1|AAK69380.1| 109|Caenorhabditis elegans Ny protein. 38 0.003
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 34 0.037
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 34 0.037
AF067215-5|AAC17010.3| 441|Caenorhabditis elegans T box family ... 31 0.26
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 30 0.80
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 30 0.80
AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family ... 29 1.1
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z83127-6|CAB05633.1| 327|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z80214-6|CAB02266.1| 327|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical p... 27 7.4
Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical p... 27 7.4
Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical p... 27 7.4
Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical p... 27 7.4
Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical p... 27 7.4
Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical p... 27 7.4
Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical p... 27 7.4
Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical p... 27 7.4
Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical pr... 27 7.4
AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical... 27 7.4
AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like pot... 27 7.4
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 26 9.8
>Z68270-9|CAE54911.1| 307|Caenorhabditis elegans Hypothetical
protein ZC410.7c protein.
Length = 307
Score = 37.9 bits (84), Expect = 0.003
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = -1
Query: 320 RVALSRFYNKIVIADDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 147
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 146 VFNEMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKRP 21
+ + E +L ++ T++H W R R+++ + P
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLRNVAAPIP 106
>Z68270-8|CAC35869.1| 309|Caenorhabditis elegans Hypothetical
protein ZC410.7b protein.
Length = 309
Score = 37.9 bits (84), Expect = 0.003
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = -1
Query: 320 RVALSRFYNKIVIADDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 147
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 146 VFNEMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKRP 21
+ + E +L ++ T++H W R R+++ + P
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLRNVAAPIP 106
>Z68270-7|CAA92571.2| 109|Caenorhabditis elegans Hypothetical
protein ZC410.7a protein.
Length = 109
Score = 37.9 bits (84), Expect = 0.003
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = -1
Query: 320 RVALSRFYNKIVIADDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 147
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 146 VFNEMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKRP 21
+ + E +L ++ T++H W R R+++ + P
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLRNVAAPIP 106
>AF202930-1|AAK69380.1| 109|Caenorhabditis elegans Ny protein.
Length = 109
Score = 37.9 bits (84), Expect = 0.003
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = -1
Query: 320 RVALSRFYNKIVIADDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 147
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 146 VFNEMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKRP 21
+ + E +L ++ T++H W R R+++ + P
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLRNVAAPIP 106
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 34.3 bits (75), Expect = 0.037
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = -1
Query: 254 LHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHR 75
+ +DYD YE + + +D +LK E + F E K ++ T ++R
Sbjct: 390 IKEDYDELYEKLKRDQRDLERDQKILK-KGTGERNKEFTETIATLRDKLRASETKNAQYR 448
Query: 74 WDPRARDKKAKKTE 33
D R RD+K KK +
Sbjct: 449 QDIRVRDEKLKKKD 462
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 34.3 bits (75), Expect = 0.037
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = -1
Query: 254 LHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHR 75
+ +DYD YE + + +D +LK E + F E K ++ T ++R
Sbjct: 390 IKEDYDELYEKLKRDQRDLERDQKILK-KGTGERNKEFTETIATLRDKLRASETKNAQYR 448
Query: 74 WDPRARDKKAKKTE 33
D R RD+K KK +
Sbjct: 449 QDIRVRDEKLKKKD 462
>AF067215-5|AAC17010.3| 441|Caenorhabditis elegans T box family
protein 32 protein.
Length = 441
Score = 31.5 bits (68), Expect = 0.26
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = -1
Query: 362 NKMSYLTRKIALIPRVALSRFYNKIVIADDGSTIVALHQDYDFPYEHSRALPEETSKDNT 183
N M ++ I L S+ N S+ AL+QD F E S + ++ + +N
Sbjct: 312 NPMDQQSKSIDLNQTTWTSQSINNQSYLSTASSPAALNQD-SFASEKSSIVRDKKNDENC 370
Query: 182 VLKMTDLDEVKRVFNEMKPEF--ARKQLSNLTLTTEHRWDP 66
LDE RVFNE+ +F QL +L+ T +P
Sbjct: 371 ------LDEFDRVFNELDQQFTPTENQLQDLSNCTTWNQEP 405
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 29.9 bits (64), Expect = 0.80
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -1
Query: 329 LIPRVALSRFYNKIVIADDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVK 150
LI L YNK+ + +G + Q + LPE LK+ DL E +
Sbjct: 315 LIQLTVLHLSYNKLELVPEGISRCVKLQKLKLDHNRLITLPEGIHLLPD-LKVLDLHENE 373
Query: 149 RVFNEMKPEFARKQLS--NLTLTTEHR 75
+ KP ARK+L+ N+ + EH+
Sbjct: 374 NLVMPPKPNDARKKLAFYNIDFSLEHQ 400
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 29.9 bits (64), Expect = 0.80
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -1
Query: 329 LIPRVALSRFYNKIVIADDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVK 150
LI L YNK+ + +G + Q + LPE LK+ DL E +
Sbjct: 315 LIQLTVLHLSYNKLELVPEGISRCVKLQKLKLDHNRLITLPEGIHLLPD-LKVLDLHENE 373
Query: 149 RVFNEMKPEFARKQLS--NLTLTTEHR 75
+ KP ARK+L+ N+ + EH+
Sbjct: 374 NLVMPPKPNDARKKLAFYNIDFSLEHQ 400
>AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family
protein 31 protein.
Length = 747
Score = 29.5 bits (63), Expect = 1.1
Identities = 28/116 (24%), Positives = 46/116 (39%)
Frame = -1
Query: 362 NKMSYLTRKIALIPRVALSRFYNKIVIADDGSTIVALHQDYDFPYEHSRALPEETSKDNT 183
N M ++ I L + N S+ AL+QD E S + ++ S +N
Sbjct: 312 NPMDQQSKSIDLNQTTWAPQSINNPGYLSTASSPAALNQDSSAS-EKSSIVRDKKSDENC 370
Query: 182 VLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKRPDL 15
LDE RVFNE+ +F K+ L+ W+ + + + P+L
Sbjct: 371 ------LDEFDRVFNELDQQFTPKEDQVQDLSNCTTWNQEPINNSIQSNQFINPEL 420
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 3.2
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -1
Query: 245 DYDFPYEHSRALPEETSKDNTVLKMTDLD-EVKRVFNEMKP--EFARKQLSNLTLTTEHR 75
+ DFP E + E+T D+ M D D E+ + KP ++K + ++E
Sbjct: 336 EMDFPIEIKSSDEEQTDLDDEEESMLDSDFEISDNEDVSKPSCSTSKKTTNRSRDSSESD 395
Query: 74 WDPRARDKKAKKTEMKRPDL 15
D R + + KK +MKR ++
Sbjct: 396 NDSRDNELQKKKRKMKRKNV 415
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -1
Query: 236 FPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHR 75
F Y R P S NT+LK D K +F E+ PE+ + + EHR
Sbjct: 197 FKYALQRKFPLYLSTKNTILKKYD-GRFKDIFAEIYPEY-EAEFKAAGIWYEHR 248
>Z83127-6|CAB05633.1| 327|Caenorhabditis elegans Hypothetical
protein C27D8.1 protein.
Length = 327
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 245 DYDFPYEHSRALPEETSKDNTVLKM 171
D D PY+ PE+TSK+ T KM
Sbjct: 302 DIDSPYDWELQKPEKTSKEPTSSKM 326
>Z80214-6|CAB02266.1| 327|Caenorhabditis elegans Hypothetical
protein C27D8.1 protein.
Length = 327
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 245 DYDFPYEHSRALPEETSKDNTVLKM 171
D D PY+ PE+TSK+ T KM
Sbjct: 302 DIDSPYDWELQKPEKTSKEPTSSKM 326
>Z46787-22|CAO78708.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 522 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 559
>Z46787-21|CAO78707.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 522 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 559
>Z46787-20|CAC42257.1| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 522 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 559
>Z46787-19|CAO78706.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 532 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 569
>Z46787-18|CAO78705.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 536 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 573
>Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 594 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 631
>Z46787-16|CAO78703.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 552 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 589
>Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 560 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 597
>Z35596-8|CAO78718.1| 666|Caenorhabditis elegans Hypothetical
protein C30D11.1h protein.
Length = 666
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 522 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 559
>Z35596-7|CAO78717.1| 714|Caenorhabditis elegans Hypothetical
protein C30D11.1g protein.
Length = 714
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 522 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 559
>Z35596-6|CAA84644.2| 791|Caenorhabditis elegans Hypothetical
protein C30D11.1f protein.
Length = 791
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 522 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 559
>Z35596-5|CAO78716.1| 801|Caenorhabditis elegans Hypothetical
protein C30D11.1e protein.
Length = 801
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 532 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 569
>Z35596-4|CAO78715.1| 805|Caenorhabditis elegans Hypothetical
protein C30D11.1d protein.
Length = 805
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 536 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 573
>Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 594 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 631
>Z35596-2|CAO78713.1| 821|Caenorhabditis elegans Hypothetical
protein C30D11.1b protein.
Length = 821
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 552 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 589
>Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 560 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 597
>AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical
protein Y116A8C.16c protein.
Length = 982
Score = 26.6 bits (56), Expect = 7.4
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -1
Query: 212 LPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWDPRAR 57
+PEETS + + +M D+DE + EM P + + + + R P AR
Sbjct: 66 IPEETSFEVEIEEMGDIDEAQG--GEMDPSAMSRMTAKVRKKSSIRVPPLAR 115
>AF257518-1|AAF68999.1| 791|Caenorhabditis elegans HERG-like
potassium channel protein.
Length = 791
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 137 EMKPEFARKQLSNLTLTTEHRWDPRARDKKAKKTEMKR 24
+M PEFA NLT+T R D ++ KK + ++ R
Sbjct: 522 DMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLR 559
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 26.2 bits (55), Expect = 9.8
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = -1
Query: 284 IADDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQL 105
+ +D + + + Y FPY + P ++D T++ L + V + P L
Sbjct: 1783 VYEDKNLTLITERWYSFPYNYRPFRPYRITRDVTIMPGATLYIEQNVEVHVWPNVRILVL 1842
Query: 104 SNLTLTTEHRWDPRARDKKAKKTE 33
NL E+ W P R K TE
Sbjct: 1843 GNLVARGEY-WQP-IRFKPINVTE 1864
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,969,783
Number of Sequences: 27780
Number of extensions: 137443
Number of successful extensions: 422
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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