Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_M13
(305 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015... 36 0.008
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662... 36 0.008
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 32 0.10
03_05_0586 - 25875703-25876332,25876426-25876713,25877064-258771... 31 0.18
06_03_1117 + 27750291-27750338,27751360-27751812,27751987-277521... 27 2.2
04_03_0989 - 21475147-21475361,21477029-21477074,21477364-21479292 27 2.2
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 27 2.2
10_05_0041 - 8469769-8470164 27 2.9
10_01_0146 - 1719997-1720386,1721498-1721515 27 3.8
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 26 5.1
05_01_0049 - 337132-337488,337613-337765,337924-338551,338617-33... 26 5.1
04_04_0176 - 23329589-23331043 26 5.1
12_02_0932 + 24519204-24519380,24520074-24520128,24520251-245222... 26 6.7
12_01_0315 + 2406211-2406478,2406911-2406927 26 6.7
09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450... 26 6.7
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633... 26 6.7
11_06_0177 + 20936072-20937550 25 8.9
09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040 25 8.9
07_03_1107 - 24024387-24024497,24025799-24026410 25 8.9
04_03_0916 + 20794240-20794246,20794585-20796545 25 8.9
01_06_0405 + 29103723-29103839,29103928-29104012,29104572-291046... 25 8.9
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 25 8.9
>09_06_0339 -
22400534-22400647,22401264-22401398,22401491-22401565,
22401646-22401648
Length = 108
Score = 35.5 bits (78), Expect = 0.008
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -3
Query: 105 EVPQYKLITPAVVSERLKVRG 43
EVP+YK ITP+V+SERL++ G
Sbjct: 54 EVPKYKQITPSVLSERLRING 74
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 157 LNNQVLFDKPTYEKLXQGSP 98
+NN VLFD+ TY+KL P
Sbjct: 37 VNNSVLFDQATYDKLLSEVP 56
>08_02_1576 +
27965862-27965864,27965952-27966026,27966113-27966247,
27967080-27967193
Length = 108
Score = 35.5 bits (78), Expect = 0.008
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -3
Query: 105 EVPQYKLITPAVVSERLKVRG 43
EVP+YK ITP+V+SERL++ G
Sbjct: 54 EVPKYKQITPSVLSERLRING 74
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 157 LNNQVLFDKPTYEKLXQGSP 98
+NN VLFD+ TY+KL P
Sbjct: 37 VNNSVLFDQATYDKLLSEVP 56
>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 31.9 bits (69), Expect = 0.10
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -3
Query: 105 EVPQYKLITPAVVSERLK 52
EVP+YK ITP+V+SERL+
Sbjct: 988 EVPKYKQITPSVLSERLR 1005
Score = 29.1 bits (62), Expect = 0.72
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 157 LNNQVLFDKPTYEKLXQGSP 98
+NN VLFDK TY+KL P
Sbjct: 971 VNNSVLFDKATYDKLLSEVP 990
>03_05_0586 -
25875703-25876332,25876426-25876713,25877064-25877194,
25877299-25877812
Length = 520
Score = 31.1 bits (67), Expect = 0.18
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 266 REGFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPGV 141
R G G + + E G+ +WR+ +EEE Q+K + E+ V
Sbjct: 345 RGGRGGESEERRRERGKGKWREEEEEEEEQQKGQEEEEEEQV 386
>06_03_1117 +
27750291-27750338,27751360-27751812,27751987-27752161,
27752227-27752551,27752705-27752786,27752820-27752889,
27753341-27753420,27753514-27753750
Length = 489
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 260 GFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPG 144
GFG S N+ +RWR + +++ Q Q ++PG
Sbjct: 427 GFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPG 465
>04_03_0989 - 21475147-21475361,21477029-21477074,21477364-21479292
Length = 729
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 169 LFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSRPSWAASL 288
+F W S L R+R+L + F+A+ P + SWAA L
Sbjct: 65 VFTWNCMVSGLIRNRMLAEARKVFDAM-PVRNSVSWAALL 103
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 278 AQEGREGFGQTASKNTEEEGRIRWRQSQEEE 186
A+E EG G K EEE R R R+ +EEE
Sbjct: 468 AEEEEEGGGGKGEKEREEEER-RQREKEEEE 497
>10_05_0041 - 8469769-8470164
Length = 131
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -1
Query: 281 AAQEGREGFGQTASKNTEEEGRIRWRQSQEEEV 183
A + GREG G+ +S ++ R RW+ +++
Sbjct: 31 ARERGREGGGEASSTTIDDGERRRWQDGLRDDL 63
>10_01_0146 - 1719997-1720386,1721498-1721515
Length = 135
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 252 PNSLKKHRRRRKDPVAAKPRRRS 184
P+ + RRRR +P +PRRR+
Sbjct: 83 PDDGGQRRRRRSEPATTQPRRRA 105
>05_03_0633 +
16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 299 NCQ-FKDAAQEGREGFGQTASKNTEEE 222
NC+ FKD +E E +T K TEE+
Sbjct: 464 NCKKFKDLVEEISESLAKTEGKETEED 490
>05_01_0049 -
337132-337488,337613-337765,337924-338551,338617-338852,
339563-339577
Length = 462
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 154 STCHELFLWTTSSSWLCRHRILPSSSVFF--EAVWPKPSRP 270
STCH++ L S WL L S + F E VW P P
Sbjct: 261 STCHKMQLPFKLSDWLSTVPTLTSLHLDFQDEMVWILPEEP 301
>04_04_0176 - 23329589-23331043
Length = 484
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 269 GREGFGQTASKNTEEEGRIRWRQSQEEEVVQR 174
GR+GF + EE GR R R +EE +R
Sbjct: 405 GRDGFDLSRKHGHEERGRYRPRVLEEEREHER 436
>12_02_0932 +
24519204-24519380,24520074-24520128,24520251-24522202,
24522288-24522446,24522878-24523049,24523131-24523429,
24524037-24524285
Length = 1020
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 263 EGFGQTASKNTEEEGRIRWRQ 201
E FG +KN+ EE RWR+
Sbjct: 7 ENFGGVKAKNSSEEALRRWRK 27
>12_01_0315 + 2406211-2406478,2406911-2406927
Length = 94
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 254 GQTASKNTEEEGRIRWRQSQE 192
G T+ + EEEGR+R R+ +E
Sbjct: 52 GLTSGRKEEEEGRVRKRRKKE 72
>09_02_0121 +
4502628-4502696,4503727-4503829,4504205-4504328,
4505963-4506306,4506383-4506487,4507907-4508288,
4509173-4509437,4509936-4510094,4511150-4511201,
4511266-4511462,4512865-4513350,4513797-4514093
Length = 860
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 23 VLFSPGXPRTFNLSDTTAGVISLYCGTSLXQFLICGFI 136
V++S G PRT TT G +S + S+ FL+C F+
Sbjct: 543 VIWSTG-PRTL----TTVGAVSTFSINSVGGFLLCTFL 575
>04_04_1699 +
35462160-35462555,35463114-35463196,35463317-35463378,
35463745-35463806,35463932-35463991,35464079-35464111,
35464196-35464261,35464349-35464393
Length = 268
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 252 PNSLKKHRRRRKDPVAAKPRRRSGP 178
P KHRR R D A PR+R P
Sbjct: 35 PPGPTKHRRLRHDADAQPPRKRGHP 59
>11_06_0177 + 20936072-20937550
Length = 492
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 171 FPLDHFFFLALPPPDP 218
FPLD+ FF PPP P
Sbjct: 218 FPLDYAFFDGGPPPRP 233
>09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040
Length = 339
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 299 NCQFKDAAQEGREGFG---QTASKNTEEEGRI 213
N + + EGR GFG Q+A + +E+EG +
Sbjct: 125 NVTVMEISMEGRHGFGSGLQSALEESEKEGNV 156
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = -3
Query: 237 KHRRRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCXKEVPQYKLITPAVVSER 58
KH ++ K P A+ GP V + +T C + + C + +T +S R
Sbjct: 175 KHSKKAKAPAASSTADAPGPAGDGVAADSTACPICDVFSSRCAAYLDCSCSVT--ALSHR 232
Query: 57 LKVR 46
LK R
Sbjct: 233 LKTR 236
>04_03_0916 + 20794240-20794246,20794585-20796545
Length = 655
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 130 VYQTTPGCSTCHELFLWTTSSSWLCRHRI 216
VY+ P S H+LF T+ +W R+ I
Sbjct: 421 VYEHMPNRSLDHQLFQTNTTLTWNIRYEI 449
>01_06_0405 +
29103723-29103839,29103928-29104012,29104572-29104674,
29104798-29104882,29105414-29105497,29105627-29105730,
29106522-29106783,29106978-29107414,29107637-29107718,
29109913-29110089,29110640-29110732,29110812-29110877,
29110992-29111038,29111165-29111430,29111443-29111845,
29111992-29112376
Length = 931
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 136 QTTPGCSTCHELFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSRPSW 276
QT C+ + T+ + CR +L S V + V P P R S+
Sbjct: 301 QTPSYCNGEDKSLPLITAKQYSCREALLSSLVVAWSPVLPSPDRSSY 347
>01_05_0195 - 19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 127 WVYQTTPGCSTCHELFLWTTSSSW 198
W+ + C C LFLW T+S W
Sbjct: 998 WLISVSSTC--CILLFLWQTNSGW 1019
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,434,446
Number of Sequences: 37544
Number of extensions: 169251
Number of successful extensions: 616
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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