Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_M13
         (305 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   0.85 
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   1.1  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   2.6  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    23   3.4  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   4.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   4.5  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          22   6.0  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    21   7.9  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    21   7.9  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 252 PNSLKKHRRRRKDPVAAKPRRR 187
           P + ++HRRRR  P     RRR
Sbjct: 327 PGAAERHRRRRPPPRRRHDRRR 348


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 278  AQEGREGFGQTASKNTEEEGRIRWRQSQEEEVVQ 177
            A EGRE       +    + RIR    Q++EVV+
Sbjct: 1099 ATEGRESAHPERREQVRPQRRIRQHMPQQKEVVE 1132


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 269 GREGFGQTASKNTEEEGRIR 210
           G  GFGQ  + NT+ EG ++
Sbjct: 505 GIVGFGQYCAANTDPEGAMK 524


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 252 PNSLKKHRRR-RKDPVAAKPRRRSGPKEKFVTS 157
           PN L++      K+PV  KP+    P+ + VT+
Sbjct: 125 PNDLQQEGETLNKEPVETKPQESEPPEMQEVTA 157


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -3

Query: 228 RRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCXK 106
           RRR+  +A   RRR  P+ +     TTR     P  R   K
Sbjct: 492 RRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKSTK 532


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 155 QLVTNFSFGP 184
           Q+ TNFSFGP
Sbjct: 338 QVYTNFSFGP 347


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 114  SFSYVGLSNNTWLFNLSRTFPLDHFFFLALPPPD 215
            S   + L++NT      R +P ++  F AL P D
Sbjct: 1391 SLQGITLTDNTRQLFFRRHYPSNNVSFCALDPDD 1424


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 175 LWTTSSSWLCRH 210
           LW  S +W+ RH
Sbjct: 123 LWLLSQTWITRH 134


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 277 PKKDAKASAKQPQ 239
           PKK A A AK+P+
Sbjct: 96  PKKQAPAKAKEPK 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,988
Number of Sequences: 2352
Number of extensions: 5938
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19992474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)