Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_M09
(780 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09587-1|AAA57001.1| 685|Homo sapiens glycyl-tRNA synthetase pr... 283 4e-76
D30658-1|BAA06338.1| 739|Homo sapiens glycyl tRNA synthetase pr... 283 4e-76
BC007755-1|AAH07755.1| 739|Homo sapiens glycyl-tRNA synthetase ... 283 4e-76
BC007722-1|AAH07722.1| 739|Homo sapiens glycyl-tRNA synthetase ... 283 4e-76
AC004976-1|AAC71652.1| 392|Homo sapiens glycyl tRNA synthetase ... 283 4e-76
U09510-1|AAA86443.1| 685|Homo sapiens glycyl-tRNA synthetase pr... 282 1e-75
X57500-1|CAA40736.1| 628|Homo sapiens nuclear factor IV protein. 31 3.5
M30938-1|AAA36154.1| 732|Homo sapiens protein ( Human Ku (p70/p... 31 3.5
J04977-1|AAA59475.1| 732|Homo sapiens G22P1 protein. 31 3.5
DQ787434-1|ABG46942.1| 732|Homo sapiens X-ray repair complement... 31 3.5
BC095442-1|AAH95442.1| 732|Homo sapiens X-ray repair complement... 31 3.5
BC019027-1|AAH19027.1| 732|Homo sapiens X-ray repair complement... 31 3.5
AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318... 31 3.5
AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318... 31 3.5
AK222603-1|BAD96323.1| 732|Homo sapiens ATP-dependent DNA helic... 31 3.5
AC012513-1|AAY24231.1| 568|Homo sapiens unknown protein. 31 3.5
>U09587-1|AAA57001.1| 685|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 685
Score = 283 bits (695), Expect = 4e-76
Identities = 128/227 (56%), Positives = 172/227 (75%), Gaps = 1/227 (0%)
Frame = -3
Query: 778 DSQAINDTLXTLDNAALEEMQKELDSNGEYTLITXRGEFKLTPSLVNVKKTQKTIHVEEI 599
D++ + + L D + EM+ L+ GE+T+ T F+LT ++NVK+ QKT++VEE+
Sbjct: 457 DAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEV 516
Query: 598 IPSVIEPSFGVGRILYCILEHNFRMREGDEQRTYFSLPPTVAPMKCVVLPLSGNAEFQPF 419
+P+VIEPSFG+GRI+Y + EH F +REGDEQRT+FS P VAP KC VLPLS N EF PF
Sbjct: 517 VPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPF 576
Query: 418 VRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVPYAVTVDFDTI-KEPHTVTLRERD 242
V++LS+ L VSHKVDDSSGSIGRRYARTDE+GV + VT+DFDT+ K PHT TLR+RD
Sbjct: 577 VKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRD 636
Query: 241 SMRQVRLPMADVPTVVRDLSNSKILWSDVEQKYPKFEQQETVKGTSV 101
SMRQ+R ++++P++V+DL+N I W+DVE +YP FE QET K ++
Sbjct: 637 SMRQIRAEISELPSIVQDLANGNITWADVEARYPLFEGQETGKKETI 683
>D30658-1|BAA06338.1| 739|Homo sapiens glycyl tRNA synthetase
protein.
Length = 739
Score = 283 bits (695), Expect = 4e-76
Identities = 128/227 (56%), Positives = 172/227 (75%), Gaps = 1/227 (0%)
Frame = -3
Query: 778 DSQAINDTLXTLDNAALEEMQKELDSNGEYTLITXRGEFKLTPSLVNVKKTQKTIHVEEI 599
D++ + + L D + EM+ L+ GE+T+ T F+LT ++NVK+ QKT++VEE+
Sbjct: 511 DAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEV 570
Query: 598 IPSVIEPSFGVGRILYCILEHNFRMREGDEQRTYFSLPPTVAPMKCVVLPLSGNAEFQPF 419
+P+VIEPSFG+GRI+Y + EH F +REGDEQRT+FS P VAP KC VLPLS N EF PF
Sbjct: 571 VPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPF 630
Query: 418 VRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVPYAVTVDFDTI-KEPHTVTLRERD 242
V++LS+ L VSHKVDDSSGSIGRRYARTDE+GV + VT+DFDT+ K PHT TLR+RD
Sbjct: 631 VKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRD 690
Query: 241 SMRQVRLPMADVPTVVRDLSNSKILWSDVEQKYPKFEQQETVKGTSV 101
SMRQ+R ++++P++V+DL+N I W+DVE +YP FE QET K ++
Sbjct: 691 SMRQIRAEISELPSIVQDLANGNITWADVEARYPLFEGQETGKKETI 737
>BC007755-1|AAH07755.1| 739|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 739
Score = 283 bits (695), Expect = 4e-76
Identities = 128/227 (56%), Positives = 172/227 (75%), Gaps = 1/227 (0%)
Frame = -3
Query: 778 DSQAINDTLXTLDNAALEEMQKELDSNGEYTLITXRGEFKLTPSLVNVKKTQKTIHVEEI 599
D++ + + L D + EM+ L+ GE+T+ T F+LT ++NVK+ QKT++VEE+
Sbjct: 511 DAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEV 570
Query: 598 IPSVIEPSFGVGRILYCILEHNFRMREGDEQRTYFSLPPTVAPMKCVVLPLSGNAEFQPF 419
+P+VIEPSFG+GRI+Y + EH F +REGDEQRT+FS P VAP KC VLPLS N EF PF
Sbjct: 571 VPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPF 630
Query: 418 VRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVPYAVTVDFDTI-KEPHTVTLRERD 242
V++LS+ L VSHKVDDSSGSIGRRYARTDE+GV + VT+DFDT+ K PHT TLR+RD
Sbjct: 631 VKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRD 690
Query: 241 SMRQVRLPMADVPTVVRDLSNSKILWSDVEQKYPKFEQQETVKGTSV 101
SMRQ+R ++++P++V+DL+N I W+DVE +YP FE QET K ++
Sbjct: 691 SMRQIRAEISELPSIVQDLANGNITWADVEARYPLFEGQETGKKETI 737
>BC007722-1|AAH07722.1| 739|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 739
Score = 283 bits (695), Expect = 4e-76
Identities = 128/227 (56%), Positives = 172/227 (75%), Gaps = 1/227 (0%)
Frame = -3
Query: 778 DSQAINDTLXTLDNAALEEMQKELDSNGEYTLITXRGEFKLTPSLVNVKKTQKTIHVEEI 599
D++ + + L D + EM+ L+ GE+T+ T F+LT ++NVK+ QKT++VEE+
Sbjct: 511 DAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEV 570
Query: 598 IPSVIEPSFGVGRILYCILEHNFRMREGDEQRTYFSLPPTVAPMKCVVLPLSGNAEFQPF 419
+P+VIEPSFG+GRI+Y + EH F +REGDEQRT+FS P VAP KC VLPLS N EF PF
Sbjct: 571 VPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPF 630
Query: 418 VRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVPYAVTVDFDTI-KEPHTVTLRERD 242
V++LS+ L VSHKVDDSSGSIGRRYARTDE+GV + VT+DFDT+ K PHT TLR+RD
Sbjct: 631 VKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRD 690
Query: 241 SMRQVRLPMADVPTVVRDLSNSKILWSDVEQKYPKFEQQETVKGTSV 101
SMRQ+R ++++P++V+DL+N I W+DVE +YP FE QET K ++
Sbjct: 691 SMRQIRAEISELPSIVQDLANGNITWADVEARYPLFEGQETGKKETI 737
>AC004976-1|AAC71652.1| 392|Homo sapiens glycyl tRNA synthetase
protein.
Length = 392
Score = 283 bits (695), Expect = 4e-76
Identities = 128/227 (56%), Positives = 172/227 (75%), Gaps = 1/227 (0%)
Frame = -3
Query: 778 DSQAINDTLXTLDNAALEEMQKELDSNGEYTLITXRGEFKLTPSLVNVKKTQKTIHVEEI 599
D++ + + L D + EM+ L+ GE+T+ T F+LT ++NVK+ QKT++VEE+
Sbjct: 164 DAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEV 223
Query: 598 IPSVIEPSFGVGRILYCILEHNFRMREGDEQRTYFSLPPTVAPMKCVVLPLSGNAEFQPF 419
+P+VIEPSFG+GRI+Y + EH F +REGDEQRT+FS P VAP KC VLPLS N EF PF
Sbjct: 224 VPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPF 283
Query: 418 VRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVPYAVTVDFDTI-KEPHTVTLRERD 242
V++LS+ L VSHKVDDSSGSIGRRYARTDE+GV + VT+DFDT+ K PHT TLR+RD
Sbjct: 284 VKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRD 343
Query: 241 SMRQVRLPMADVPTVVRDLSNSKILWSDVEQKYPKFEQQETVKGTSV 101
SMRQ+R ++++P++V+DL+N I W+DVE +YP FE QET K ++
Sbjct: 344 SMRQIRAEISELPSIVQDLANGNITWADVEARYPLFEGQETGKKETI 390
>U09510-1|AAA86443.1| 685|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 685
Score = 282 bits (691), Expect = 1e-75
Identities = 127/227 (55%), Positives = 172/227 (75%), Gaps = 1/227 (0%)
Frame = -3
Query: 778 DSQAINDTLXTLDNAALEEMQKELDSNGEYTLITXRGEFKLTPSLVNVKKTQKTIHVEEI 599
D++ + + L D + E++ L+ GE+T+ T F+LT ++NVK+ QKT++VEE+
Sbjct: 457 DAKLVMEYLAICDECYITEIEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEV 516
Query: 598 IPSVIEPSFGVGRILYCILEHNFRMREGDEQRTYFSLPPTVAPMKCVVLPLSGNAEFQPF 419
+P+VIEPSFG+GRI+Y + EH F +REGDEQRT+FS P VAP KC VLPLS N EF PF
Sbjct: 517 VPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPF 576
Query: 418 VRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVPYAVTVDFDTI-KEPHTVTLRERD 242
V++LS+ L VSHKVDDSSGSIGRRYARTDE+GV + VT+DFDT+ K PHT TLR+RD
Sbjct: 577 VKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRD 636
Query: 241 SMRQVRLPMADVPTVVRDLSNSKILWSDVEQKYPKFEQQETVKGTSV 101
SMRQ+R ++++P++V+DL+N I W+DVE +YP FE QET K ++
Sbjct: 637 SMRQIRAEISELPSIVQDLANGNITWADVEARYPLFEGQETGKKETI 683
>X57500-1|CAA40736.1| 628|Homo sapiens nuclear factor IV protein.
Length = 628
Score = 31.5 bits (68), Expect = 3.5
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = -3
Query: 658 LTPSLVNVKKTQKTIHVEEIIPSVIEPSFGVGRILYCILEHNFRMRE---GDEQRTYFSL 488
L S+ KK +KT +E++ P+ P+ R+ C+L RE +Q + L
Sbjct: 353 LIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNML 412
Query: 487 PPTVAPMKCVVLPLSGNAEFQPFVRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVP 308
P +PLS P + ++ +T + + G ++ +T++ G
Sbjct: 413 NPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQDNHEDGPTAKK-LKTEQGGAH 471
Query: 307 YAVT 296
++V+
Sbjct: 472 FSVS 475
>M30938-1|AAA36154.1| 732|Homo sapiens protein ( Human Ku (p70/p80)
subunit mRNA, complete cds. ).
Length = 732
Score = 31.5 bits (68), Expect = 3.5
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = -3
Query: 658 LTPSLVNVKKTQKTIHVEEIIPSVIEPSFGVGRILYCILEHNFRMRE---GDEQRTYFSL 488
L S+ KK +KT +E++ P+ P+ R+ C+L RE +Q + L
Sbjct: 457 LIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNML 516
Query: 487 PPTVAPMKCVVLPLSGNAEFQPFVRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVP 308
P +PLS P + ++ +T + + G ++ +T++ G
Sbjct: 517 NPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQDNHEDGPTAKK-LKTEQGGAH 575
Query: 307 YAVT 296
++V+
Sbjct: 576 FSVS 579
>J04977-1|AAA59475.1| 732|Homo sapiens G22P1 protein.
Length = 732
Score = 31.5 bits (68), Expect = 3.5
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = -3
Query: 658 LTPSLVNVKKTQKTIHVEEIIPSVIEPSFGVGRILYCILEHNFRMRE---GDEQRTYFSL 488
L S+ KK +KT +E++ P+ P+ R+ C+L RE +Q + L
Sbjct: 457 LIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNML 516
Query: 487 PPTVAPMKCVVLPLSGNAEFQPFVRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVP 308
P +PLS P + ++ +T + + G ++ +T++ G
Sbjct: 517 NPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQDNHEDGPTAKK-LKTEQGGAH 575
Query: 307 YAVT 296
++V+
Sbjct: 576 FSVS 579
>DQ787434-1|ABG46942.1| 732|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 5 (double-
protein.
Length = 732
Score = 31.5 bits (68), Expect = 3.5
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = -3
Query: 658 LTPSLVNVKKTQKTIHVEEIIPSVIEPSFGVGRILYCILEHNFRMRE---GDEQRTYFSL 488
L S+ KK +KT +E++ P+ P+ R+ C+L RE +Q + L
Sbjct: 457 LIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNML 516
Query: 487 PPTVAPMKCVVLPLSGNAEFQPFVRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVP 308
P +PLS P + ++ +T + + G ++ +T++ G
Sbjct: 517 NPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQDNHEDGPTAKK-LKTEQGGAH 575
Query: 307 YAVT 296
++V+
Sbjct: 576 FSVS 579
>BC095442-1|AAH95442.1| 732|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 5 (double-
protein.
Length = 732
Score = 31.5 bits (68), Expect = 3.5
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = -3
Query: 658 LTPSLVNVKKTQKTIHVEEIIPSVIEPSFGVGRILYCILEHNFRMRE---GDEQRTYFSL 488
L S+ KK +KT +E++ P+ P+ R+ C+L RE +Q + L
Sbjct: 457 LIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNML 516
Query: 487 PPTVAPMKCVVLPLSGNAEFQPFVRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVP 308
P +PLS P + ++ +T + + G ++ +T++ G
Sbjct: 517 NPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQDNHEDGPTAKK-LKTEQGGAH 575
Query: 307 YAVT 296
++V+
Sbjct: 576 FSVS 579
>BC019027-1|AAH19027.1| 732|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 5 (double-
protein.
Length = 732
Score = 31.5 bits (68), Expect = 3.5
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = -3
Query: 658 LTPSLVNVKKTQKTIHVEEIIPSVIEPSFGVGRILYCILEHNFRMRE---GDEQRTYFSL 488
L S+ KK +KT +E++ P+ P+ R+ C+L RE +Q + L
Sbjct: 457 LIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNML 516
Query: 487 PPTVAPMKCVVLPLSGNAEFQPFVRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVP 308
P +PLS P + ++ +T + + G ++ +T++ G
Sbjct: 517 NPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQDNHEDGPTAKK-LKTEQGGAH 575
Query: 307 YAVT 296
++V+
Sbjct: 576 FSVS 579
>AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 31.5 bits (68), Expect = 3.5
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = -3
Query: 463 CVVLPLSGNAEFQPFVRDLSQELITVDVS-----HKVDDSSGSIGRRYARTDELGVPYAV 299
C + N E + V++LS+ ++ VS H +DDS+ + G RY E+ P +
Sbjct: 1770 CRESEIETNTELKERVKELSEGIVDEGVSTSIGPHSIDDSNLNHGNRYMWEGEVKQPNLL 1829
Query: 298 TVDFDTIKEPHTVTLRERDSMRQVRL 221
+D + + +T E S ++L
Sbjct: 1830 MIDKEAEQSNKLMTGSETPSKVVIKL 1855
>AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 31.5 bits (68), Expect = 3.5
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = -3
Query: 463 CVVLPLSGNAEFQPFVRDLSQELITVDVS-----HKVDDSSGSIGRRYARTDELGVPYAV 299
C + N E + V++LS+ ++ VS H +DDS+ + G RY E+ P +
Sbjct: 1770 CRESEIETNTELKERVKELSEGIVDEGVSTSIGPHSIDDSNLNHGNRYMWEGEVKQPNLL 1829
Query: 298 TVDFDTIKEPHTVTLRERDSMRQVRL 221
+D + + +T E S ++L
Sbjct: 1830 MIDKEAEQSNKLMTGSETPSKVVIKL 1855
>AK222603-1|BAD96323.1| 732|Homo sapiens ATP-dependent DNA helicase
II variant protein.
Length = 732
Score = 31.5 bits (68), Expect = 3.5
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = -3
Query: 658 LTPSLVNVKKTQKTIHVEEIIPSVIEPSFGVGRILYCILEHNFRMRE---GDEQRTYFSL 488
L S+ KK +KT +E++ P+ P+ R+ C+L RE +Q + L
Sbjct: 457 LIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNML 516
Query: 487 PPTVAPMKCVVLPLSGNAEFQPFVRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVP 308
P +PLS P + ++ +T + + G ++ +T++ G
Sbjct: 517 NPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQDNHEDGPTAKK-LKTEQGGAH 575
Query: 307 YAVT 296
++V+
Sbjct: 576 FSVS 579
>AC012513-1|AAY24231.1| 568|Homo sapiens unknown protein.
Length = 568
Score = 31.5 bits (68), Expect = 3.5
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = -3
Query: 658 LTPSLVNVKKTQKTIHVEEIIPSVIEPSFGVGRILYCILEHNFRMRE---GDEQRTYFSL 488
L S+ KK +KT +E++ P+ P+ R+ C+L RE +Q + L
Sbjct: 293 LIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNML 352
Query: 487 PPTVAPMKCVVLPLSGNAEFQPFVRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVP 308
P +PLS P + ++ +T + + G ++ +T++ G
Sbjct: 353 NPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQEIFQDNHEDGPTAKK-LKTEQGGAH 411
Query: 307 YAVT 296
++V+
Sbjct: 412 FSVS 415
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,656,574
Number of Sequences: 237096
Number of extensions: 2486320
Number of successful extensions: 5089
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5083
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -