Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_M08
         (692 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0032 - 247971-248107,248369-248468,248861-248959,249617-24...    91   6e-19
01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900...    41   8e-04
01_06_0716 - 31425189-31426460                                         29   2.6  
01_02_0098 - 11087875-11089110,11091744-11092022                       28   8.1  

>01_01_0032 -
           247971-248107,248369-248468,248861-248959,249617-249781,
           249860-249940,250316-250384,250695-250790,252232-252282,
           253361-253419,254255-254324,254325-254553,254674-255098,
           255361-255441
          Length = 553

 Score = 91.5 bits (217), Expect = 6e-19
 Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
 Frame = -1

Query: 665 FTCSPSNNLYARLTQQRFKQTIVRAIYGGRTEATKRILAQLPISAQSYSGSPYLDLGLFS 486
           F  S SNN++A L Q R   TI         +  K+++A LP + QS S SPY DL LF 
Sbjct: 416 FISSHSNNVHA-LDQLR---TIKNKANSTSQQFVKKMMASLPYTCQSQSPSPYFDLSLFR 471

Query: 485 YDDKWVSVMERPKAYGEYPIRFYA-RDSGLLKFKIYAGVLGQSVPPSARRLVAFTFHPTD 309
           YD+K +S ++R +   E+PI+F + +   ++KFKI  G    +    A+R+ +F FHP  
Sbjct: 472 YDEKLISAIDRHRHCTEHPIKFISVKQPNVVKFKIKPGSDSGASDSRAKRISSFLFHPFF 531

Query: 308 PFAISVQRTNSE-YIVNFHIR 249
           P A+S+Q+T  +  +VN H R
Sbjct: 532 PLALSIQQTYMQPTVVNLHFR 552


>01_04_0143 +
           16689471-16689498,16689687-16689818,16689974-16690013,
           16690214-16690280,16690349-16690431,16690755-16690821,
           16692741-16692821,16693696-16693791,16694172-16694198
          Length = 206

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 563 KRILAQLPISAQSYSGSPYLDLGLFSYDDKWVSVMER 453
           K+++A LP + QS S SPY DL LF Y DK +S ++R
Sbjct: 170 KKMMASLPYTCQSQSPSPYFDLSLFRY-DKLISAIDR 205


>01_06_0716 - 31425189-31426460
          Length = 423

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +1

Query: 331 ATSLRALGGTDCPKTPAYILNFNSPESLA*NLMGYS 438
           A SLRAL  +DCP  P  +L    PE LA  L  +S
Sbjct: 100 APSLRALSFSDCPAAPPRLL---PPEQLAAGLRAFS 132


>01_02_0098 - 11087875-11089110,11091744-11092022
          Length = 504

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 205 IDPKLYSYFQLNTAFLM*KLTMYSEFVLCTLIAKGSVGWNVKAT 336
           I P  +SYF L  +++M      +E VL  L    SV W++ AT
Sbjct: 206 IQPNKFSYFVLTESYIMMNDIESAEKVLKELQEVNSVPWSLYAT 249


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,055,827
Number of Sequences: 37544
Number of extensions: 307424
Number of successful extensions: 566
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)