Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_L15
(734 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC142988-1|AAI42989.1| 645|Homo sapiens splicing factor 4 protein. 31 5.7
BC063784-1|AAH63784.1| 643|Homo sapiens SF4 protein protein. 31 5.7
AY072917-1|AAL68961.1| 641|Homo sapiens RNA-binding protein spl... 31 5.7
AK022007-1|BAB13952.1| 602|Homo sapiens protein ( Homo sapiens ... 31 5.7
AJ224877-1|CAB82785.1| 560|Homo sapiens Huntingtin Associated P... 31 5.7
AJ012824-1|CAC09418.1| 671|Homo sapiens huntingtin-associated p... 31 5.7
AF521128-1|AAN77123.1| 645|Homo sapiens splicing factor 4 protein. 31 5.7
AF040723-1|AAC39861.1| 619|Homo sapiens neuroan1 protein. 31 5.7
AC004475-1|AAC08052.1| 608|Homo sapiens F23858_1 protein. 31 5.7
AB209105-1|BAD92342.1| 593|Homo sapiens huntingtin-associated p... 31 5.7
AK096419-1|BAC04782.1| 520|Homo sapiens protein ( Homo sapiens ... 30 9.9
>BC142988-1|AAI42989.1| 645|Homo sapiens splicing factor 4 protein.
Length = 645
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = -3
Query: 312 DRIALFIAEGGPECFQQKTENLKT----CFLNLKQSFPTVESANNLSLVEKCAKVDEMTS 145
+++A F+AEGGPE + E+ K FL+ K S + ++ + K A+ + S
Sbjct: 193 EKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRKEAQKSQAAS 252
Query: 144 CIVKSLEECSTPTPANMAESLIKFMRKDSP 55
V E+ N+AE L +F+ P
Sbjct: 253 QKVSPPED---EEVKNLAEKLARFIADGGP 279
>BC063784-1|AAH63784.1| 643|Homo sapiens SF4 protein protein.
Length = 643
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = -3
Query: 312 DRIALFIAEGGPECFQQKTENLKT----CFLNLKQSFPTVESANNLSLVEKCAKVDEMTS 145
+++A F+AEGGPE + E+ K FL+ K S + ++ + K A+ + S
Sbjct: 191 EKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRKEAQKSQAAS 250
Query: 144 CIVKSLEECSTPTPANMAESLIKFMRKDSP 55
V E+ N+AE L +F+ P
Sbjct: 251 QKVSPPED---EEVKNLAEKLARFIADGGP 277
>AY072917-1|AAL68961.1| 641|Homo sapiens RNA-binding protein splice
variant a protein.
Length = 641
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = -3
Query: 312 DRIALFIAEGGPECFQQKTENLKT----CFLNLKQSFPTVESANNLSLVEKCAKVDEMTS 145
+++A F+AEGGPE + E+ K FL+ K S + ++ + K A+ + S
Sbjct: 189 EKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRKEAQKSQAAS 248
Query: 144 CIVKSLEECSTPTPANMAESLIKFMRKDSP 55
V E+ N+AE L +F+ P
Sbjct: 249 QKVSPPED---EEVKNLAEKLARFIADGGP 275
>AK022007-1|BAB13952.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ11945 fis, clone HEMBB1000693, highly similar to
Homo sapiens neuroan1 mRNA. ).
Length = 602
Score = 30.7 bits (66), Expect = 5.7
Identities = 11/44 (25%), Positives = 27/44 (61%)
Frame = +2
Query: 59 ESLRMNLISDSAMFAGVGVEHSSRDFTIQEVISSTFAHFSTRLK 190
E+ RMN+++ + +G+G H ++ +Q++ + AH+ +L+
Sbjct: 532 EATRMNVVTSALEASGLGPSHLDMNYVLQQLANWQDAHYRRQLR 575
>AJ224877-1|CAB82785.1| 560|Homo sapiens Huntingtin Associated
Protein protein.
Length = 560
Score = 30.7 bits (66), Expect = 5.7
Identities = 11/44 (25%), Positives = 27/44 (61%)
Frame = +2
Query: 59 ESLRMNLISDSAMFAGVGVEHSSRDFTIQEVISSTFAHFSTRLK 190
E+ RMN+++ + +G+G H ++ +Q++ + AH+ +L+
Sbjct: 490 EATRMNVVTSALEASGLGPSHLDMNYVLQQLANWQDAHYRRQLR 533
>AJ012824-1|CAC09418.1| 671|Homo sapiens huntingtin-associated
protein 1 protein.
Length = 671
Score = 30.7 bits (66), Expect = 5.7
Identities = 11/44 (25%), Positives = 27/44 (61%)
Frame = +2
Query: 59 ESLRMNLISDSAMFAGVGVEHSSRDFTIQEVISSTFAHFSTRLK 190
E+ RMN+++ + +G+G H ++ +Q++ + AH+ +L+
Sbjct: 601 EATRMNVVTSALEASGLGPSHLDMNYVLQQLANWQDAHYRRQLR 644
>AF521128-1|AAN77123.1| 645|Homo sapiens splicing factor 4 protein.
Length = 645
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = -3
Query: 312 DRIALFIAEGGPECFQQKTENLKT----CFLNLKQSFPTVESANNLSLVEKCAKVDEMTS 145
+++A F+AEGGPE + E+ K FL+ K S + ++ + K A+ + S
Sbjct: 193 EKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRKEAQKSQAAS 252
Query: 144 CIVKSLEECSTPTPANMAESLIKFMRKDSP 55
V E+ N+AE L +F+ P
Sbjct: 253 QKVSPPED---EEVKNLAEKLARFIADGGP 279
>AF040723-1|AAC39861.1| 619|Homo sapiens neuroan1 protein.
Length = 619
Score = 30.7 bits (66), Expect = 5.7
Identities = 11/44 (25%), Positives = 27/44 (61%)
Frame = +2
Query: 59 ESLRMNLISDSAMFAGVGVEHSSRDFTIQEVISSTFAHFSTRLK 190
E+ RMN+++ + +G+G H ++ +Q++ + AH+ +L+
Sbjct: 549 EATRMNVVTSALEASGLGPSHLDMNYVLQQLANWQDAHYRRQLR 592
>AC004475-1|AAC08052.1| 608|Homo sapiens F23858_1 protein.
Length = 608
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = -3
Query: 312 DRIALFIAEGGPECFQQKTENLKT----CFLNLKQSFPTVESANNLSLVEKCAKVDEMTS 145
+++A F+AEGGPE + E+ K FL+ K S + ++ + K A+ + S
Sbjct: 156 EKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRKEAQKSQAAS 215
Query: 144 CIVKSLEECSTPTPANMAESLIKFMRKDSP 55
V E+ N+AE L +F+ P
Sbjct: 216 QKVSPPED---EEVKNLAEKLARFIADGGP 242
>AB209105-1|BAD92342.1| 593|Homo sapiens huntingtin-associated
protein 1 isoform 2 variant protein.
Length = 593
Score = 30.7 bits (66), Expect = 5.7
Identities = 11/44 (25%), Positives = 27/44 (61%)
Frame = +2
Query: 59 ESLRMNLISDSAMFAGVGVEHSSRDFTIQEVISSTFAHFSTRLK 190
E+ RMN+++ + +G+G H ++ +Q++ + AH+ +L+
Sbjct: 523 EATRMNVVTSALEASGLGPSHLDMNYVLQQLANWQDAHYRRQLR 566
>AK096419-1|BAC04782.1| 520|Homo sapiens protein ( Homo sapiens
cDNA FLJ39100 fis, clone NTONG2001587, moderately
similar to KERATIN, TYPE II CYTOSKELETAL 4. ).
Length = 520
Score = 29.9 bits (64), Expect = 9.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 267 QQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCI 139
Q +TENLK +L+ + E L+L + AKVDE+ + +
Sbjct: 340 QSQTENLKKQNASLQAAITDAEQRGELALKDAQAKVDELEAAL 382
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,503,735
Number of Sequences: 237096
Number of extensions: 2069866
Number of successful extensions: 5385
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5385
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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