Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_L15
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    31   1.1  
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    30   1.5  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      30   1.5  
AL032626-10|CAA21531.1|  458|Caenorhabditis elegans Hypothetical...    29   4.5  
AF039716-2|AAB96737.1|  462|Caenorhabditis elegans Hypothetical ...    29   4.5  
AC024801-4|AAF59648.4|  485|Caenorhabditis elegans Hypothetical ...    29   4.5  
U64837-2|AAB04836.3|  213|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical ...    28   7.9  
AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical ...    28   7.9  

>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = -3

Query: 675 AAGVLXDDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 562
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = -3

Query: 675 AAGVLXDDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 562
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 387 DYANHINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 280
           D   ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 62  DKKGNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 387 DYANHINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 280
           D   ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 62  DKKGNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 387 DYANHINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 280
           D   ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 62  DKKGNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>AL032626-10|CAA21531.1|  458|Caenorhabditis elegans Hypothetical
           protein Y37D8A.12a protein.
          Length = 458

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = -3

Query: 276 ECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPAN 97
           E  ++K   L T   NL    P ++ A  L + EK  K    T    K      TP   +
Sbjct: 374 ESSKRKAPKLSTDLTNL---VPLLQQAQMLPVTEKATKEKLQTP---KQSPMPGTPENTS 427

Query: 96  MAESLIKFMRKDSPCHTALPK 34
           +  SLIK  +K+S    A P+
Sbjct: 428 LPPSLIKKKKKESTSEQAAPE 448


>AF039716-2|AAB96737.1|  462|Caenorhabditis elegans Hypothetical
           protein W03G9.3 protein.
          Length = 462

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = -3

Query: 276 ECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPAN 97
           E  ++K   L T   NL    P ++ A  L + EK  K    T    K      TP   +
Sbjct: 378 ESSKRKAPKLSTDLTNL---VPLLQQAQMLPVTEKATKEKLQTP---KQSPMPGTPENTS 431

Query: 96  MAESLIKFMRKDSPCHTALPK 34
           +  SLIK  +K+S    A P+
Sbjct: 432 LPPSLIKKKKKESTSEQAAPE 452


>AC024801-4|AAF59648.4|  485|Caenorhabditis elegans Hypothetical
           protein Y50D7A.3a protein.
          Length = 485

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 99  LRVSVWNTLRGISR-YRRSSHQLLRIFQQGSSYWRIPQWGSSVSNLKSM 242
           L V ++  L G +  Y R    +LR+ QQG   +R  QW +  +  K++
Sbjct: 226 LGVIMYTLLAGCAPFYHRKQLMMLRLIQQGKFEFRNEQWANITAEAKNL 274


>U64837-2|AAB04836.3|  213|Caenorhabditis elegans Hypothetical
           protein T27E4.5 protein.
          Length = 213

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = -3

Query: 291 AEGGPECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEEC 118
           A   PE  ++KTE  KTC   L+ ++   +++     V+ C K D+   C+  ++++C
Sbjct: 132 ANHSPE-IERKTEEFKTCPSQLQMAYFCQKTSTARKTVKPC-KTDQ--DCMFSNVQKC 185


>AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical
           protein F32D1.2 protein.
          Length = 54

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = -3

Query: 675 AAGVLXDDFSQITAVVTSQCTK---NNAEDKVPEVEAALRTFGN 553
           AAG+    +SQI A +T +CTK     A  K PE    + T+ N
Sbjct: 6   AAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTWEN 49


>AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.4 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 588 PEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 490
           PE E  +RT G+   G++D+N  +   + A+PN
Sbjct: 64  PEFEVEIRTNGHIYAGILDINGAEPGDKGAEPN 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,537,845
Number of Sequences: 27780
Number of extensions: 342244
Number of successful extensions: 1055
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)