Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_L13
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 97 1e-20
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 97 1e-20
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 97 1e-20
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 97 1e-20
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 96 1e-20
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 96 1e-20
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 66 1e-11
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 66 1e-11
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 52 4e-07
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 52 4e-07
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 52 4e-07
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 52 4e-07
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 52 4e-07
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 51 5e-07
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 51 5e-07
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 50 1e-06
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 50 1e-06
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 50 1e-06
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 50 1e-06
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 50 1e-06
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical p... 27 6.8
Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical pr... 27 6.8
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 27 6.8
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -1
Query: 553 SXQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 422
S QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -1
Query: 553 SXQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 422
S QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -1
Query: 553 SXQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 422
S QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = -1
Query: 553 SXQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 422
S QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 96.3 bits (229), Expect = 1e-20
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -1
Query: 553 SXQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 422
S QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 96.3 bits (229), Expect = 1e-20
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -1
Query: 553 SXQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 422
S QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -1
Query: 553 SXQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 422
S QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 380 SKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -1
Query: 553 SXQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 422
S QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 380 SKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 29 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 51.2 bits (117), Expect = 5e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 400 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 51.2 bits (117), Expect = 5e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 51.2 bits (117), Expect = 5e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 372 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 399 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 393 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 46.4 bits (105), Expect = 1e-05
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = -1
Query: 547 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
+F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y +
Sbjct: 397 KFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAE 437
>Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 339 TLSSLY*ITPLSTSRLSRDPQYFCFSYLYSNF 244
TLSS++ + P ++ Q++ FS +YSNF
Sbjct: 772 TLSSMFKLDPPFADNVTDIDQHYFFSNIYSNF 803
>Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 339 TLSSLY*ITPLSTSRLSRDPQYFCFSYLYSNF 244
TLSS++ + P ++ Q++ FS +YSNF
Sbjct: 772 TLSSMFKLDPPFADNVTDIDQHYFFSNIYSNF 803
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 336 LSSLY*ITPLSTSRLSRDPQYFCFSYLYSNF 244
LS ++ + P + ++ Q+F FS LYSNF
Sbjct: 742 LSKIFQLLPGFSENVTETDQHFFFSNLYSNF 772
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,368,695
Number of Sequences: 27780
Number of extensions: 177433
Number of successful extensions: 526
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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