Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_L08
         (693 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1Z076 Cluster: ELAV-like protein; n=1; Bombyx mori|Rep...    40   0.058
UniRef50_A0NG60 Cluster: ENSANGP00000030050; n=1; Anopheles gamb...    37   0.41 
UniRef50_A2E477 Cluster: Putative uncharacterized protein; n=1; ...    37   0.54 
UniRef50_Q8F6E3 Cluster: Alginate o-acetyltransferase; n=4; Lept...    33   6.6  
UniRef50_Q15K50 Cluster: NADH dehydrogenase subunit 4L; n=1; Flu...    33   8.8  

>UniRef50_A1Z076 Cluster: ELAV-like protein; n=1; Bombyx mori|Rep:
           ELAV-like protein - Bombyx mori (Silk moth)
          Length = 268

 Score = 39.9 bits (89), Expect = 0.058
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -3

Query: 691 GYLXHGQPLSVSFKTQKR 638
           GYL HGQPLSVSFKTQKR
Sbjct: 251 GYLLHGQPLSVSFKTQKR 268


>UniRef50_A0NG60 Cluster: ENSANGP00000030050; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000030050 - Anopheles gambiae
           str. PEST
          Length = 56

 Score = 37.1 bits (82), Expect = 0.41
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +1

Query: 496 RSCSVWCCVLKVFSALFVSAN*FYHNVITFVYFYYYCIVFKVFRVNIISFAF 651
           R+C V+C       A FV    F +  IT + FY+Y IVF  FR ++  F F
Sbjct: 1   RTCVVYCFSFICLFAFFV----FVYGTITNIVFYFYFIVFLHFRYSLFMFFF 48


>UniRef50_A2E477 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1069

 Score = 36.7 bits (81), Expect = 0.54
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = +3

Query: 27  PSNXKKQCAGQHESHFKIMKMNFNSANFILNV*ILYNLAFVL 152
           PSN K++    HE+  K +K NFN  ++   V ILYNL  +L
Sbjct: 298 PSNDKEKIKLIHETVLKTIKQNFNGKDYQYQVSILYNLKILL 339


>UniRef50_Q8F6E3 Cluster: Alginate o-acetyltransferase; n=4;
           Leptospira|Rep: Alginate o-acetyltransferase -
           Leptospira interrogans
          Length = 510

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 535 SALFVSAN*FYHNVITFVYFYYYCIVFK-VFRVNIISFAF 651
           SA F+        V+T+++F+Y CIV K VF  N+I FAF
Sbjct: 472 SAFFIFEKPVIVRVLTYLFFFY-CIVLKGVFGKNVIYFAF 510


>UniRef50_Q15K50 Cluster: NADH dehydrogenase subunit 4L; n=1;
           Flustrellidra hispida|Rep: NADH dehydrogenase subunit 4L
           - Flustrellidra hispida
          Length = 88

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -1

Query: 444 TLLSLFMSNNLFI*LVECFKFTRILRFVLICLLF 343
           +LLS+  S N+ + L+ CF+ T +  F+LI +LF
Sbjct: 13  SLLSMLFSRNMLLSLILCFEVTSLACFMLIVVLF 46


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,287,011
Number of Sequences: 1657284
Number of extensions: 8779110
Number of successful extensions: 15643
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15618
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)