Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_L06
         (619 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070378-1|AAH70378.1|  158|Homo sapiens basic transcription fac...    36   0.15 
BC022371-1|AAH22371.1|  158|Homo sapiens BTF3L4 protein protein.       36   0.15 
BC021004-1|AAH21004.1|  153|Homo sapiens BTF3L4 protein protein.       36   0.15 
AL445685-6|CAI17032.1|  158|Homo sapiens basic transcription fac...    36   0.15 
AL139156-5|CAI22856.1|  158|Homo sapiens basic transcription fac...    36   0.15 
AK027750-1|BAB55342.1|  158|Homo sapiens protein ( Homo sapiens ...    36   0.15 
X74070-1|CAA52200.1|  162|Homo sapiens transcription factor BTF3...    32   1.4  
X53281-1|CAA37376.1|  162|Homo sapiens general transcription fac...    32   1.4  
X53280-1|CAA37375.1|  206|Homo sapiens general transcription fac...    32   1.4  
BT007120-1|AAP35784.1|  162|Homo sapiens basic transcription fac...    32   1.4  
BC008062-1|AAH08062.1|  162|Homo sapiens basic transcription fac...    32   1.4  
AB062126-1|BAB93458.1|  162|Homo sapiens transcription factor BT...    32   1.4  
AY392939-1|AAS85879.1|  141|Homo sapiens immunoglobulin heavy ch...    31   4.3  
BC062736-1|AAH62736.1|  102|Homo sapiens LOC503543 protein protein.    30   7.5  
AF262176-1|AAF80065.1|  133|Homo sapiens immunoglobulin heavy ch...    29   9.9  

>BC070378-1|AAH70378.1|  158|Homo sapiens basic transcription factor
           3-like 4 protein.
          Length = 158

 Score = 35.5 bits (78), Expect = 0.15
 Identities = 18/25 (72%), Positives = 20/25 (80%), Gaps = 3/25 (12%)
 Frame = -3

Query: 596 APKPL---EEDDEVPNLVGNFDEAS 531
           APKP    EEDD+VP+LV NFDEAS
Sbjct: 129 APKPEDIDEEDDDVPDLVENFDEAS 153


>BC022371-1|AAH22371.1|  158|Homo sapiens BTF3L4 protein protein.
          Length = 158

 Score = 35.5 bits (78), Expect = 0.15
 Identities = 18/25 (72%), Positives = 20/25 (80%), Gaps = 3/25 (12%)
 Frame = -3

Query: 596 APKPL---EEDDEVPNLVGNFDEAS 531
           APKP    EEDD+VP+LV NFDEAS
Sbjct: 129 APKPEDIDEEDDDVPDLVENFDEAS 153


>BC021004-1|AAH21004.1|  153|Homo sapiens BTF3L4 protein protein.
          Length = 153

 Score = 35.5 bits (78), Expect = 0.15
 Identities = 18/25 (72%), Positives = 20/25 (80%), Gaps = 3/25 (12%)
 Frame = -3

Query: 596 APKPL---EEDDEVPNLVGNFDEAS 531
           APKP    EEDD+VP+LV NFDEAS
Sbjct: 124 APKPEDIDEEDDDVPDLVENFDEAS 148


>AL445685-6|CAI17032.1|  158|Homo sapiens basic transcription factor
           3-like 4 protein.
          Length = 158

 Score = 35.5 bits (78), Expect = 0.15
 Identities = 18/25 (72%), Positives = 20/25 (80%), Gaps = 3/25 (12%)
 Frame = -3

Query: 596 APKPL---EEDDEVPNLVGNFDEAS 531
           APKP    EEDD+VP+LV NFDEAS
Sbjct: 129 APKPEDIDEEDDDVPDLVENFDEAS 153


>AL139156-5|CAI22856.1|  158|Homo sapiens basic transcription factor
           3-like 4 protein.
          Length = 158

 Score = 35.5 bits (78), Expect = 0.15
 Identities = 18/25 (72%), Positives = 20/25 (80%), Gaps = 3/25 (12%)
 Frame = -3

Query: 596 APKPL---EEDDEVPNLVGNFDEAS 531
           APKP    EEDD+VP+LV NFDEAS
Sbjct: 129 APKPEDIDEEDDDVPDLVENFDEAS 153


>AK027750-1|BAB55342.1|  158|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
           TRANSCRIPTION FACTOR BTF3. ).
          Length = 158

 Score = 35.5 bits (78), Expect = 0.15
 Identities = 18/25 (72%), Positives = 20/25 (80%), Gaps = 3/25 (12%)
 Frame = -3

Query: 596 APKPL---EEDDEVPNLVGNFDEAS 531
           APKP    EEDD+VP+LV NFDEAS
Sbjct: 129 APKPEDIDEEDDDVPDLVENFDEAS 153


>X74070-1|CAA52200.1|  162|Homo sapiens transcription factor BTF3
           protein.
          Length = 162

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -3

Query: 581 EEDDEVPNLVGNFDEAS 531
           ++DDEVP+LV NFDEAS
Sbjct: 141 DDDDEVPDLVENFDEAS 157


>X53281-1|CAA37376.1|  162|Homo sapiens general transcription factor
           protein.
          Length = 162

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -3

Query: 581 EEDDEVPNLVGNFDEAS 531
           ++DDEVP+LV NFDEAS
Sbjct: 141 DDDDEVPDLVENFDEAS 157


>X53280-1|CAA37375.1|  206|Homo sapiens general transcription factor
            protein.
          Length = 206

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -3

Query: 581 EEDDEVPNLVGNFDEAS 531
           ++DDEVP+LV NFDEAS
Sbjct: 185 DDDDEVPDLVENFDEAS 201


>BT007120-1|AAP35784.1|  162|Homo sapiens basic transcription factor
           3 protein.
          Length = 162

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -3

Query: 581 EEDDEVPNLVGNFDEAS 531
           ++DDEVP+LV NFDEAS
Sbjct: 141 DDDDEVPDLVENFDEAS 157


>BC008062-1|AAH08062.1|  162|Homo sapiens basic transcription factor
           3 protein.
          Length = 162

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -3

Query: 581 EEDDEVPNLVGNFDEAS 531
           ++DDEVP+LV NFDEAS
Sbjct: 141 DDDDEVPDLVENFDEAS 157


>AB062126-1|BAB93458.1|  162|Homo sapiens transcription factor BTF 3
           protein.
          Length = 162

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -3

Query: 581 EEDDEVPNLVGNFDEAS 531
           ++DDEVP+LV NFDEAS
Sbjct: 141 DDDDEVPDLVENFDEAS 157


>AY392939-1|AAS85879.1|  141|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 141

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 398 MSRVSEAICVSKE*FSLLFHYVPGCMNFIMYCICLER 288
           MSRV+  +  SK  FSL+ + V      + YC+ L+R
Sbjct: 73  MSRVTMPVDTSKNQFSLILNLVTAADTAVYYCVSLQR 109


>BC062736-1|AAH62736.1|  102|Homo sapiens LOC503543 protein protein.
          Length = 102

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -3

Query: 581 EEDDEVPNLVGNFDEAS 531
           ++DDEVP ++ NFDEAS
Sbjct: 81  DDDDEVPGIMENFDEAS 97


>AF262176-1|AAF80065.1|  133|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 133

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 434 INHK-YSFNLLTYMSRVSEAICVSKE*FSLLFHYVPGCMNFIMYCI 300
           INH   SFN  +  SRV+ ++  SK  FSL+   V      + YC+
Sbjct: 51  INHSGTSFNNPSLESRVTTSVDTSKNQFSLMLTSVTAADTAVYYCV 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,003,195
Number of Sequences: 237096
Number of extensions: 1347129
Number of successful extensions: 4227
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4227
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)