Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_L04
         (326 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr...    31   3.7  
UniRef50_Q54D83 Cluster: Putative uncharacterized protein; n=2; ...    31   4.9  
UniRef50_A7T0I5 Cluster: Predicted protein; n=1; Nematostella ve...    31   4.9  
UniRef50_Q4RIU2 Cluster: Chromosome undetermined SCAF15041, whol...    31   6.5  
UniRef50_UPI0000D9969F Cluster: PREDICTED: similar to dishevelle...    30   8.6  
UniRef50_Q993S2 Cluster: Structural polyprotein; n=1; Seal louse...    30   8.6  
UniRef50_Q4U8R7 Cluster: Protein kinase, putative; n=3; Theileri...    30   8.6  

>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
           alga; n=1; Ostreococcus tauri|Rep: T08009 probable
           ribosomal protein L5-green alga - Ostreococcus tauri
          Length = 331

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 78  MGPSRCRQNSQEVSRRNM-QSTQQVKYTQRQLGRCR 182
           MG  R ++ SQ V++    QS  QVK+ +R+LG C+
Sbjct: 1   MGKRRQKRKSQSVAKTTAYQSRYQVKFARRRLGACK 36


>UniRef50_Q54D83 Cluster: Putative uncharacterized protein; n=2;
           Eukaryota|Rep: Putative uncharacterized protein -
           Dictyostelium discoideum AX4
          Length = 988

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 11/30 (36%), Positives = 22/30 (73%)
 Frame = +3

Query: 99  QNSQEVSRRNMQSTQQVKYTQRQLGRCRQL 188
           Q +Q++ ++ MQ  QQ++Y Q+QL + +Q+
Sbjct: 36  QQAQQLQQQQMQHQQQIQYAQQQLQQAQQI 65


>UniRef50_A7T0I5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 242

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = -2

Query: 160 CVYFTCCVLCIFRLLTSWLFCLHL-----LGPIHLXRALIDNQKAILNA 29
           CVY  C   C+F     WL C+ L      G + L  ++ + Q+  LNA
Sbjct: 147 CVYLPCIAFCLFLFRKIWLLCISLGLNGVGGSLILIPSVPEMQRCCLNA 195


>UniRef50_Q4RIU2 Cluster: Chromosome undetermined SCAF15041, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF15041, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 275

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 175 RPSCRCVYFTCCVLCIFRLLTSWLFCL 95
           RP+C C     C   +F L  SW FCL
Sbjct: 178 RPACTCSCLRWCSSLLFPLQGSWCFCL 204


>UniRef50_UPI0000D9969F Cluster: PREDICTED: similar to dishevelled,
           dsh homolog 1; n=1; Macaca mulatta|Rep: PREDICTED:
           similar to dishevelled, dsh homolog 1 - Macaca mulatta
          Length = 602

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 181 LHRPSCRCVYFTCCVLCI 128
           LH P+C+CV ++C  +C+
Sbjct: 585 LHMPACKCVRYSCLCVCV 602


>UniRef50_Q993S2 Cluster: Structural polyprotein; n=1; Seal louse
           virus|Rep: Structural polyprotein - Seal louse virus
          Length = 661

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 3   TVSHNRNSIAFKIAFWLSISARXKCMGPSRCRQNSQ 110
           TV+     I F +A WL  SAR KC+ P     N+Q
Sbjct: 467 TVTALLTVIGFALAAWLICSARNKCLTPYALTPNAQ 502


>UniRef50_Q4U8R7 Cluster: Protein kinase, putative; n=3;
           Theileria|Rep: Protein kinase, putative - Theileria
           annulata
          Length = 979

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +3

Query: 54  SISARXKCMGPSRCRQNSQEVSRRNMQSTQQVKYTQRQLGRCRQ---LGTHTPKALR 215
           ++ ++ +C GP+    N+ +V +  M  +  + Y Q   G   Q   + T TP+ +R
Sbjct: 440 NLDSKTRCNGPNASSNNNNQVDQSTMTPSVTLNYNQHDAGDLIQRNNVPTSTPRRIR 496


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,913,084
Number of Sequences: 1657284
Number of extensions: 2778491
Number of successful extensions: 7958
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7952
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)