Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_K21
         (786 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965...    30   2.4  
11_04_0216 - 14954047-14956098                                         29   4.2  
05_05_0317 + 24039343-24042717                                         29   5.5  

>04_04_1630 - 34896021-34896143,34896329-34896403,34896500-34896556,
            34897176-34897352,34897426-34897492,34898043-34898101,
            34898188-34898241,34898455-34898604,34898709-34898918,
            34898980-34899039,34899399-34899527,34899616-34899720,
            34899935-34900024,34900630-34900695,34901047-34901115,
            34901348-34901467,34901572-34901634,34901681-34901817,
            34902070-34902160,34902298-34902463,34902700-34904172,
            34905666-34905940,34906322-34906819,34906996-34907145,
            34907840-34907911,34908006-34908266,34908478-34908558,
            34908745-34908996,34909323-34909382,34909602-34909853,
            34910385-34910549,34910589-34910849,34911267-34912307,
            34913398-34913457,34914055-34914165,34914448-34914534,
            34915227-34915300,34915397-34915490,34915644-34915689,
            34916397-34916521
          Length = 2501

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = +3

Query: 399  NVAKRKVIILWATPTYTLTHNWYAFTYTTLHFIPTHISAVTMRTSQLYWTHAPKTGSL*R 578
            N + R ++I+      T TH+  A  Y TLH++      +      ++ TH PK  ++ R
Sbjct: 1112 NCSSRSLVIIDELGRGTSTHDGVAIAYATLHYLLKEKKCMV-----IFVTHYPKILNILR 1166

Query: 579  RADTSPSAHRTALTSGR 629
              + S  A+  +  + R
Sbjct: 1167 EFEGSVGAYHVSYLATR 1183


>11_04_0216 - 14954047-14956098
          Length = 683

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -1

Query: 417 LFFSRHSLCNIC---PIVCPTYLYIAVLRADSPC 325
           LFF+RH L   C   P++  T L +AVL   +PC
Sbjct: 55  LFFARHLLALACFFSPLLATTALLLAVLVTVAPC 88


>05_05_0317 + 24039343-24042717
          Length = 1124

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 729 SEDLSCKCRRRRRSYIHKFIGTKRKRTLV 643
           S  LS  C  R R+    F+G KR RTL+
Sbjct: 524 SRHLSFSCHNRSRTSFEDFLGFKRARTLL 552


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,668,625
Number of Sequences: 37544
Number of extensions: 403011
Number of successful extensions: 833
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)