Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_K17
(532 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC119.06 |sco1||copper chaperone Sco1|Schizosaccharomyces pomb... 161 6e-41
SPCC576.03c |tpx1||thioredoxin peroxidase Tpx1|Schizosaccharomyc... 29 0.33
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 27 1.3
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 1.7
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 27 1.7
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 3.0
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 7.0
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 25 9.3
SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb... 25 9.3
>SPBC119.06 |sco1||copper chaperone Sco1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 263
Score = 161 bits (391), Expect = 6e-41
Identities = 65/154 (42%), Positives = 111/154 (72%), Gaps = 3/154 (1%)
Frame = -2
Query: 531 IGGSFELVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPP 352
+GG+F L++ G V DF GK+ LIYFGFT CPDICPDEL+K++ +D+ +
Sbjct: 97 LGGAFSLIDHHGNRVTDNDFKGKFSLIYFGFTRCPDICPDELDKMSAAIDIVNNVVGD-V 155
Query: 351 LQPVFISVDPQRDTPELVGKYCKEFTPRLLGLTGTKEQVQQACKSYRVYFSAGPQDVD-- 178
+ P+FI+ DP RD P+ + +Y ++F P+++GLTG+ E+++ CK +RVYFS P+++D
Sbjct: 156 VYPIFITCDPARDPPQEMAEYLEDFNPKIVGLTGSYEEIKDICKKFRVYFST-PKNIDPK 214
Query: 177 -NDYIVDHTIIVYLVNPDGEFVDYYGQNRNAKEI 79
+DY+VDH++ YL++P+G+F++ +G+N ++++
Sbjct: 215 KDDYLVDHSVFFYLMDPEGKFIEVFGRNSTSEDL 248
>SPCC576.03c |tpx1||thioredoxin peroxidase Tpx1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 192
Score = 29.5 bits (63), Expect = 0.33
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 513 LVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDELEKLAE 391
+VN + +K AD+ GKW+ + F +CP E+ +E
Sbjct: 17 VVNGAFEEIKLADYKGKWVFLGFYPLDFTFVCPTEIVAFSE 57
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -2
Query: 348 QPVFISVDPQRDTPELVGKYCKEFTPRLLGLTGTKEQVQQACKSYRVYFSAGPQDVDN 175
QP FI +D + E + K KE++ + L +T TKE + C + + A ++ DN
Sbjct: 232 QPGFIQLDIASNLQE-IKKGTKEYSLKSLEMTTTKESNETLCSNDSKHRIARLKNEDN 288
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -2
Query: 474 FLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSP 355
FLG+ +I G T C D P E K V + TPS P
Sbjct: 152 FLGQVQVIIHGKTECYDCNPKEPPKTYPVCTIR-STPSQP 190
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 378 HDKTPSSPPLQPVFISVDPQRDTPELVG 295
H TPSSP + F+SV P P+ G
Sbjct: 120 HVATPSSPTISNSFVSVSPLLKRPQQKG 147
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 26.2 bits (55), Expect = 3.0
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +2
Query: 221 LQACWTCSFVPVKPNNLGVNSLQYLPTNSGVSL*GSTDMKTGCKGGDDGVLSCKSTTSAN 400
LQ T +P+ G++S P+ S S+ S+++ GG+ G+++ + S N
Sbjct: 165 LQMNTTLDDIPILLRRPGLSSYTPGPSTSRRSISSSSNL-----GGNPGLIANNPSASKN 219
Query: 401 FSNSSGQIS 427
F+ +SG S
Sbjct: 220 FAFTSGSSS 228
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.0 bits (52), Expect = 7.0
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = -2
Query: 477 DFLGKWM---LIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTP 307
D +GK + L + G + P++ D L D + + V++ V + P
Sbjct: 1254 DLMGKTLSSVLFHAGKSSDPNLTVDFLAYHKAAADTFEVAKTQKKTSSVYLFV--KYLDP 1311
Query: 306 ELVGKYCKEFTPRLLGLTGTKEQV 235
L+ +C EF P++ L+ ++++
Sbjct: 1312 SLLDFFCSEFVPKITELSKEEDKL 1335
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 24.6 bits (51), Expect = 9.3
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 471 LGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRD 313
+ K +L Y F P + E EK++++ L +T S P P F S + D
Sbjct: 328 ISKDLLEYKSFRIPPLVEAAESEKISQLSTLEKRTLPSFPYNPFFSSSTAEID 380
>SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 24.6 bits (51), Expect = 9.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 477 DFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPS 361
DFL + L + G C P+ L +++ +D+HD + S
Sbjct: 323 DFLIETYLDHAGEKFCLQYDPNSLLYISKAMDMHDMSAS 361
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,255,628
Number of Sequences: 5004
Number of extensions: 47970
Number of successful extensions: 118
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 218398248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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