Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_K17
(532 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0449 - 3229260-3229365,3230264-3230396,3230536-3230625,323... 178 3e-45
09_03_0087 - 12237226-12237346,12237423-12237555,12237641-122377... 132 2e-31
08_01_0675 - 5840867-5841253,5842699-5842997,5844022-5844202 29 3.1
11_02_0119 - 8502455-8503015,8503311-8504009,8504512-8504571,850... 28 4.1
04_04_1095 - 30839573-30839769,30839817-30839964,30840421-308409... 28 4.1
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 28 5.4
04_01_0286 + 3800617-3801720,3801945-3801989,3802063-3802203,380... 28 5.4
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875... 28 5.4
09_06_0205 - 21567467-21567655,21567791-21567876,21567965-215680... 27 7.1
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840... 27 7.1
05_07_0118 + 27811125-27811180,27811724-27811733,27814651-278147... 27 9.4
03_04_0013 + 16436438-16436536,16437257-16437742,16437791-164378... 27 9.4
>02_01_0449 -
3229260-3229365,3230264-3230396,3230536-3230625,
3231097-3231309,3232317-3232407,3232519-3232707,
3232810-3232920,3233018-3233110
Length = 341
Score = 178 bits (433), Expect = 3e-45
Identities = 78/163 (47%), Positives = 115/163 (70%)
Frame = -2
Query: 531 IGGSFELVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPP 352
IGG F L+N +GK V DF GKW L+YFGFTHCPDICPDEL+K+A +D K +
Sbjct: 181 IGGPFNLLNHDGKPVTQKDFFGKWTLLYFGFTHCPDICPDELQKMALAID-KIKEKAKME 239
Query: 351 LQPVFISVDPQRDTPELVGKYCKEFTPRLLGLTGTKEQVQQACKSYRVYFSAGPQDVDND 172
+ PVFI+VDP+RDT E V Y EF P L+GLTGT +++++ ++YRVY+ ++ +D
Sbjct: 240 VVPVFITVDPERDTVEQVRDYVNEFHPNLIGLTGTTDEIRKVARAYRVYYMK-TEEEGSD 298
Query: 171 YIVDHTIIVYLVNPDGEFVDYYGQNRNAKEIYESMLVNIKKYE 43
Y+VDH+I++YL+NP EFV +YG+N +A + + ++ +K ++
Sbjct: 299 YLVDHSIVMYLMNPKMEFVKFYGKNYDADSLADGIIKELKGHQ 341
>09_03_0087 -
12237226-12237346,12237423-12237555,12237641-12237730,
12238992-12239198,12239738-12239813,12240019-12240148,
12241024-12241121
Length = 284
Score = 132 bits (318), Expect = 2e-31
Identities = 66/169 (39%), Positives = 105/169 (62%)
Frame = -2
Query: 531 IGGSFELVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPP 352
IGG F+L ++E K V + G W L+YFG+T CPDI P E++K+A+VV L + +
Sbjct: 119 IGGPFKLYDTENKEVTESKLRGNWTLMYFGYTSCPDIGPAEVQKMADVVKLLE-SKYGTK 177
Query: 351 LQPVFISVDPQRDTPELVGKYCKEFTPRLLGLTGTKEQVQQACKSYRVYFSAGPQDVDND 172
+ P+FI++DPQRD+P + Y EF PR++GLTG+ V+Q + YRV+F D+ D
Sbjct: 178 ITPLFITIDPQRDSPAQLKAYLSEFDPRIIGLTGSINAVRQIAQEYRVFFKK-VDDIGQD 236
Query: 171 YIVDHTIIVYLVNPDGEFVDYYGQNRNAKEIYESMLVNIKKYEAAKKXT 25
Y+V+ + +YL++P E +G A ++ E++ + I+K A+K T
Sbjct: 237 YLVESSHNMYLLDPCLETARCFGAEYEASDLAEAITLEIQK--ASKSST 283
>08_01_0675 - 5840867-5841253,5842699-5842997,5844022-5844202
Length = 288
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 429 PDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVD-PQRDTPELVGKY 289
P +E L +DL TPS PPL +I+ D TP +VG Y
Sbjct: 177 PSPSSEEAVTLPNELDL-PATPSLPPLIDAYIAFDSAPTTTPSMVGSY 223
>11_02_0119 -
8502455-8503015,8503311-8504009,8504512-8504571,
8504744-8504800
Length = 458
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +1
Query: 7 LNALKPCXFLCSFIFLNVH*H*FINFFGIPILSIII 114
++A K +CS ++L+++ ++ FG+ IL+I++
Sbjct: 408 VSAAKSSQQICSIVYLSIYQSLYLRLFGVLILAILL 443
>04_04_1095 -
30839573-30839769,30839817-30839964,30840421-30840903,
30841419-30841910,30842267-30842362
Length = 471
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -2
Query: 513 LVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDELEKLAEVVD-LHDKTPSSPPLQPVF 337
+++++G +D GK + +YFG CP C ++L E D L P + Q +F
Sbjct: 189 VISADGIKTPISDLNGKTIGLYFGAHWCPP-CRAFTKQLREAYDELKALRPGN--FQVIF 245
Query: 336 ISVD 325
IS+D
Sbjct: 246 ISMD 249
>10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,
3384640-3384709,3385878-3386002,3387128-3387268,
3387362-3387519,3387644-3387803,3390136-3390213,
3390326-3390385,3390473-3390528,3391886-3392090,
3394107-3394192,3394296-3394406,3394536-3394607,
3395453-3395538,3395730-3395878,3396107-3396250,
3396335-3396442,3396997-3397027,3397609-3397713,
3398283-3398407,3398807-3398950,3399073-3399177,
3400748-3400799,3401549-3401696,3401936-3402130,
3402404-3402647,3403152-3403259,3403887-3404034,
3405467-3405525,3405876-3405945,3407008-3407333,
3407666-3409204,3410526-3410733,3410870-3410906,
3411024-3411072,3411143-3411271
Length = 2025
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/74 (21%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -2
Query: 264 LGLTGTKEQVQQACKSYRVYFSAGPQDVDNDYIVDHTI---IVYLVNPDGEFVDYYGQNR 94
+ +T T+ V+ ACKS + + P +VDN ++ + + L+ +D+ Q++
Sbjct: 1385 ISITTTQSAVRCACKSLQSAVDSLPPEVDNSGVLFPPLSGQVELLLTITRILLDHAKQSK 1444
Query: 93 NAKEIYESMLVNIK 52
+++ +Y +++ +K
Sbjct: 1445 SSRHLYPVIVLLMK 1458
>04_01_0286 +
3800617-3801720,3801945-3801989,3802063-3802203,
3802368-3802397,3802519-3803025
Length = 608
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 300 VGKYCKEFTPRLLGLTGTKEQVQQACKSYRVYFSAG 193
+G YC E P +G+++ + C S VYFS G
Sbjct: 170 LGLYCMELDP-----SGSRQYYDKLCNSSTVYFSTG 200
>01_06_0595 -
30485460-30486097,30486721-30487179,30487339-30487558,
30488229-30489980
Length = 1022
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 414 DELEKL-AEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKEF 277
D+ + L A+ L K P + VFI V P D P ++ C++F
Sbjct: 472 DDCDTLPADTWSLISKVVDRAPRRVVFILVSPNLDLPHIILSRCQKF 518
>09_06_0205 -
21567467-21567655,21567791-21567876,21567965-21568037,
21568267-21568326,21568887-21568935,21569328-21569431,
21569587-21569640,21569719-21569763,21569817-21569879,
21570415-21570615,21570620-21570797,21570900-21570993,
21571075-21572478,21572560-21572604,21572710-21572788,
21573424-21573589,21573679-21573771,21573872-21573929,
21574063-21574120,21574210-21574367,21575130-21575177,
21575269-21575320,21575404-21575529
Length = 1160
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 352 FATSLHISRPSEGHTRVSWQVL*GVYTKIVRFNWNK 245
FA S HISRP++ WQ + + + + W K
Sbjct: 237 FALSGHISRPTDVFCNKDWQTVMYFFERTITDYWKK 272
>08_02_0776 -
21083181-21083187,21083256-21083683,21083800-21084048,
21084172-21084248,21084351-21084483
Length = 297
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 510 VNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPP 352
+ ++G+ ++S + +L P+ EL +LA VD+ + SSPP
Sbjct: 162 MEAQGRYLQSVLRRAQQVLADHSLASSPEAATAELSELASAVDIECMSSSSPP 214
>05_07_0118 +
27811125-27811180,27811724-27811733,27814651-27814707,
27814816-27814986,27815101-27815185,27815811-27815901,
27815975-27816139,27816563-27816682,27816774-27816846,
27817725-27817884,27817968-27818833,27819143-27819229
Length = 646
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 423 ICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKEF 277
+ P E+E + V H TP S L+P V+P+ P G C +F
Sbjct: 291 VSPWEIELTSSVSGSHLSTPHSKRLKPCLPHVNPEYMVPR--GGGCPDF 337
>03_04_0013 +
16436438-16436536,16437257-16437742,16437791-16437826,
16437835-16438323,16438951-16439622
Length = 593
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = -2
Query: 513 LVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFI 334
++ +G V ++ +GK +L+YF CP C L KL V + + + VFI
Sbjct: 363 VLGKDGAKVPVSELVGKTVLLYFSAKWCPP-CRAFLPKL--VNEYNKIKEKHNDFEIVFI 419
Query: 333 SVDPQRDT 310
S D ++ +
Sbjct: 420 SSDREQSS 427
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,435,793
Number of Sequences: 37544
Number of extensions: 301642
Number of successful extensions: 721
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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