Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_K17
         (532 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.5  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   5.9  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   5.9  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   5.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.9  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    21   5.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.9  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   5.9  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 462 WMLIYFGFTHCPDICPDE 409
           + L+Y     CPD CP +
Sbjct: 343 FFLMYVIVPFCPDCCPSD 360


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 462 WMLIYFGFTHCPDICPDE 409
           + L+Y     CPD CP +
Sbjct: 343 FFLMYVIVPFCPDCCPSD 360


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 462 WMLIYFGFTHCPDICPDE 409
           + L+Y     CPD CP +
Sbjct: 343 FFLMYVIVPFCPDCCPSD 360


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 303 TLVCPSEGRLI*RLVAKVVMMEFCHVNP 386
           T+ CP +GRL  +  A ++   +  V P
Sbjct: 157 TISCPIDGRLNSKQAAVIIAFTWFWVTP 184


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -2

Query: 99  NRNAKEIYESMLVNIKK 49
           N N K++Y++ ++NI++
Sbjct: 110 NNNYKKLYKNYIINIEQ 126


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -2

Query: 99  NRNAKEIYESMLVNIKK 49
           N N K++Y++ ++NI++
Sbjct: 110 NNNYKKLYKNYIINIEQ 126


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 162 DHTIIVYLVNPDGEFVDYYGQNRN 91
           ++T +VY   P    +DY G++ N
Sbjct: 505 EYTPVVYKKTPHAMGLDYVGEDDN 528


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 348 QPVFISVDPQRDTPELVGKYCKEFTPRLLG 259
           +P++ ++      P  V  YC  F PR +G
Sbjct: 332 KPLYYNIINIEQIPVPVPIYCGNFPPRPMG 361


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 256 NWNKGTSPASLQVL*SVLQCRAT 188
           NW+ GT    L V   VL C A+
Sbjct: 106 NWSFGTIMCDLWVSFDVLSCTAS 128


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 303 TLVCPSEGRLI*RLVAKVVMMEFCHVNP 386
           T+ CP +GRL  +  A ++   +  V P
Sbjct: 157 TISCPIDGRLNSKQAAVIIAFTWFWVTP 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,107
Number of Sequences: 438
Number of extensions: 3408
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)