Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_K14
         (344 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   1.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   1.3  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   2.3  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    20   7.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   7.2  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                20   7.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    20   9.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   9.5  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    20   9.5  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 129 EDYWNWPHAXFEDCTG 82
           + Y +W  A +EDC+G
Sbjct: 110 QPYPDWSFAKYEDCSG 125


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 123 YWNWPHAXFEDCTG 82
           Y +W  A +EDC+G
Sbjct: 113 YPDWSFAKYEDCSG 126


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 129 EDYWNWPHAXFEDCTGGASV 70
           E Y NW  A  ++C+G  SV
Sbjct: 106 EPYPNWSWAKNQNCSGITSV 125


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +2

Query: 164 VILLQDIHIGRILIFECDMTIYHIFCITYGSYFGAY 271
           +IL  ++H+    + E  +    IF  T   Y+G +
Sbjct: 179 IILADELHLTEYKLVEKWVNSSEIFYTTSQQYYGHF 214


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 219 ISHSKIKMRPMWI 181
           + H+KI +RP W+
Sbjct: 222 LRHTKIWLRPDWL 234


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 253 VLFRRLPKLEVPFVILSLLTIRKHRPAE 336
           +LFR+LP   +    +  L+ + HRP +
Sbjct: 247 MLFRKLPFAGLHSHTIIYLSAKGHRPID 274


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 80  PPVQSSNXACG 112
           PPVQ ++  CG
Sbjct: 80  PPVQDADFCCG 90


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 283 PQASVSAEIRPIRYAEDVVDRHITFKN 203
           P      E+RPI+  +D  + +  +KN
Sbjct: 131 PPGRFFCEVRPIKRVKDSTNCNCGWKN 157


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 233 IFCITYGSYFGAY 271
           +FCIT+G   G +
Sbjct: 245 VFCITFGLVAGQF 257


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,531
Number of Sequences: 438
Number of extensions: 1978
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)