Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_K03
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 33 0.17
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 33 0.17
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 33 0.17
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 33 0.17
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 33 0.30
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 31 0.91
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 30 1.6
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.6
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.6
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 30 2.1
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.8
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 29 4.8
U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid precurs... 28 6.4
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical pr... 28 8.5
U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical pr... 28 8.5
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 8.5
AL021572-2|CAA16518.1| 415|Caenorhabditis elegans Hypothetical ... 28 8.5
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 28 8.5
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 8.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 8.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 8.5
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 28 8.5
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 33.5 bits (73), Expect = 0.17
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Frame = -3
Query: 768 SADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPT 589
SA + A+ P+ EVQ V + S SA +E S SA +P + D
Sbjct: 62 SAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDV 120
Query: 588 VES----DAAAVPEIKTPEAADAPKLADNPVDED 499
+S DA+A + PEA +AP++A +DE+
Sbjct: 121 PDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 153
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -3
Query: 729 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKT 550
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 19 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 78
Query: 549 PEAADAPKLADNP 511
PE D P + P
Sbjct: 79 PEVQDVPDSSGAP 91
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 33.5 bits (73), Expect = 0.17
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Frame = -3
Query: 768 SADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPT 589
SA + A+ P+ EVQ V + S SA +E S SA +P + D
Sbjct: 99 SAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDV 157
Query: 588 VES----DAAAVPEIKTPEAADAPKLADNPVDED 499
+S DA+A + PEA +AP++A +DE+
Sbjct: 158 PDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -3
Query: 729 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKT 550
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 549 PEAADAPKLADNP 511
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 33.5 bits (73), Expect = 0.17
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Frame = -3
Query: 768 SADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPT 589
SA + A+ P+ EVQ V + S SA +E S SA +P + D
Sbjct: 99 SAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDV 157
Query: 588 VES----DAAAVPEIKTPEAADAPKLADNPVDED 499
+S DA+A + PEA +AP++A +DE+
Sbjct: 158 PDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -3
Query: 729 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKT 550
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 549 PEAADAPKLADNP 511
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 33.5 bits (73), Expect = 0.17
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Frame = -3
Query: 768 SADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPT 589
SA + A+ P+ EVQ V + S SA +E S SA +P + D
Sbjct: 99 SAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDV 157
Query: 588 VES----DAAAVPEIKTPEAADAPKLADNPVDED 499
+S DA+A + PEA +AP++A +DE+
Sbjct: 158 PDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -3
Query: 729 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKT 550
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 549 PEAADAPKLADNP 511
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 32.7 bits (71), Expect = 0.30
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -3
Query: 756 KVEEPAAQP-EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVES 580
K+EE A + E+ K ++Q+ A D S D +IP VK I PT+
Sbjct: 435 KLEEHAVKKLEEEKDKLQSAAAPEDDSPASPPMDCPASPDMVPVIPQTVKIIPTVPTIPL 494
Query: 579 DAAAVPEIKTPEA 541
+ V +++ P A
Sbjct: 495 ETQDV-DMREPSA 506
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 32.7 bits (71), Expect = 0.30
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = -3
Query: 750 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAA 571
+EPAA E+ K + V E KEE P++ +E D + K AP + ++
Sbjct: 148 KEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDEPVVNTEEKKDAAEAPAADEESE 205
Query: 570 AVPEIKTPEAADAP 529
A E K E AP
Sbjct: 206 AAEE-KVAETTVAP 218
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 31.5 bits (68), Expect = 0.69
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = -3
Query: 768 SADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 592
SA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LAP
Sbjct: 67 SASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLAP 125
Query: 591 TVESDAAAVPEIKTPEAADAPKLADNPVDE-DKPAD 487
AA V + +A+ AP V E +K AD
Sbjct: 126 -----AAPVAPPQLTQASPAPVAPAVLVPEKEKTAD 156
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 31.1 bits (67), Expect = 0.91
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Frame = -3
Query: 768 SADIKVEEPAAQPEDSKTEVQ----ATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 601
SA VEE AA E ++ V+ AT A S E+P A +A+S P K +
Sbjct: 614 SAPASVEE-AAPSESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEEHKDE 672
Query: 600 LAPT-VES--DAAAVPEIKTPEAADAP 529
+PT +ES D + + E+A AP
Sbjct: 673 ASPTALESVEDVIEAVHVASTESAPAP 699
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = -3
Query: 741 AAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAAIIPNMVKKIDLAPTVESDAAA 568
AA DS AT S E +A TD+ SAD+ A + + A + E+ A
Sbjct: 306 AANSYDSAGGDAATAPAPSSEAADAAAPTDSAASADTTAALVDTSSSEHAAESTEAPATD 365
Query: 567 VPEIKTPEAADAP-KLADNPVDEDKPADI 484
+ +T A P +AD D P+ I
Sbjct: 366 IAATETTPAPSVPAPVADAAAGYDSPSSI 394
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 678 EKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADN-PVDE 502
EKP++ +AE D + K ++L V A PE PEA+ K + P D
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADS 339
Query: 501 DKP 493
P
Sbjct: 340 TTP 342
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = -3
Query: 762 DIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVE 583
D K E P +P+ + E + +KP +T + + +AA K+ PT E
Sbjct: 347 DTKKETPTKKPKVELVTAKTVEGEKKETKKPKSTTKKPTKTAAA----STKR---PPTTE 399
Query: 582 SDAAAVPEIKTPEAADAPKLADNPVDEDK 496
A E+K+ AA P ++ P D+
Sbjct: 400 KPTATTEEVKSTTAAAKP--SERPTGHDE 426
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/85 (23%), Positives = 29/85 (34%)
Frame = -3
Query: 747 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAA 568
E +A PE + + S P S+A+ P APT + +
Sbjct: 197 ESSASPEMLRLAKHYKIGSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPK 256
Query: 567 VPEIKTPEAADAPKLADNPVDEDKP 493
P + A +PK PV KP
Sbjct: 257 APVVAPTRRAPSPKAPVAPVAPVKP 281
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -3
Query: 753 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 607
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -3
Query: 756 KVEEPAAQPEDSKTEV-QATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVES 580
K ++ + E+ + EV + + + SK K +A+D + + A + K P E
Sbjct: 194 KSKDDDSSDEEEEEEVKEKSPKKSSKSTKRAASDDDEEEEPVATKKSKKSKRAETPEEED 253
Query: 579 DAAAVPEIKTPEAADAPKLADNPVDEDK 496
D +KTP+ K A+ P +ED+
Sbjct: 254 DEEE-EVVKTPKKTKKSKRAETPEEEDE 280
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3
Query: 612 KKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 484
KK D P+ VP TP+ A P P ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 735 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 592
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 735 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 592
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 684 KEEKPSATDAEGSADSAAIIPNMVKKI-DLAPTVESDAAAVPEIKTPEAADAPKLADNPV 508
+ E+ S +EG++ +I P KKI D+AP + D + + + ++ P +A+ P
Sbjct: 188 RRERQSPVYSEGTSSEKSISPPPAKKIKDMAPAL-PDYSVISKPNLLQSLIFPMIAEQPS 246
Query: 507 DEDKP 493
P
Sbjct: 247 TSQSP 251
>U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform b protein.
Length = 684
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = -3
Query: 762 DIKVEEPAAQP--EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPT 589
D+K A+P E +V T A S+EE + E + P+M KK+ +
Sbjct: 475 DVKAPTTTAKPVKETDNAKVLPTEASDSEEEADEYYEDEDD-EQVKKTPDMKKKVKVVDI 533
Query: 588 VESDAAAVPEIKTPEAADAPKLADNPVDED 499
+ E K P+ + D+ D++
Sbjct: 534 KPKEVTIEEEKKAPKLVETSVQTDDEDDDE 563
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = -3
Query: 738 AQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPE 559
A+P D + A A K + + G ADS P K D +P A VP+
Sbjct: 570 AKPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKEPEKSKPRDPSPKKAVPAKPVPK 629
Query: 558 IK-TPEAADAPKLADNPVD 505
+ P A P+ P D
Sbjct: 630 TEVAPAAVKKPEPISKPKD 648
>Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical
protein F45E6.2 protein.
Length = 589
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = -1
Query: 344 PQKVRNHLTNPNLKKTNLR*TAEALSGGRVLTVFDTRPLLAANTLTRAPL---PTREIN- 177
P V N+L N T+ GRV+T D+ P+ A T+ P+ P N
Sbjct: 342 PFNVDNNLNINNQIMAISNETSMVARHGRVITYEDSAPV--AKIPTQQPIHNYPNSTQND 399
Query: 176 CSIYV*NYPM*VRVAFSTPRWITVYFLD 93
C +Y N +RV RW+ V+ D
Sbjct: 400 CDMYKLNATETIRVNNDIERWVQVHSFD 427
>U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical
protein R08C7.5 protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 714 EVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVP-EIKTPEAA 538
++ TVA+ KE+KP + +A A I +V KI T ++ AVP E+K +AA
Sbjct: 335 KIPKTVAQPPKEKKPVMESVKTAAPPAKEIKPIVAKI----TEKAAEPAVPKEVKPAKAA 390
Query: 537 DA 532
A
Sbjct: 391 TA 392
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = -3
Query: 756 KVEE-PAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPNMVKKIDLAP 592
KVEE PA+ + KT ++ E+ KE+ PS+ + +S P ++ +P
Sbjct: 1800 KVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSP 1859
Query: 591 TVESDAAAVPEIKTPEAADAPK 526
T + P+ K ++ +A K
Sbjct: 1860 TPKKSPPGSPKKKKSKSPEAEK 1881
>AL021572-2|CAA16518.1| 415|Caenorhabditis elegans Hypothetical
protein W06H3.2 protein.
Length = 415
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 648 SADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVD 505
+A++ A P + +A S AA + PEA DAPK A+ P +
Sbjct: 356 TANAEAEEPEKKTFVTMAAACASKAAKEQDGVAPEAQDAPKEAEAPAE 403
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = -3
Query: 738 AQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA-AIIPNMVKKIDLAPTVESDAAAVP 562
A+P + E A E + E P+A A G A+ A A P+ A E+ AA
Sbjct: 287 AEPAGAAPEAAAAAPEAAPEAAPAAEGAGGGAEPAGAAAPDAAAAAPEAAPAEAAPAAEG 346
Query: 561 EIKTPEAADAPKLADNPVDEDKPAD 487
E A A A E PA+
Sbjct: 347 AGGGAEPAGAAPDAAAAAPEAAPAE 371
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = -3
Query: 756 KVEE-PAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPNMVKKIDLAP 592
KVEE PA+ + KT ++ E+ KE+ PS+ + +S P ++ +P
Sbjct: 1800 KVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSP 1859
Query: 591 TVESDAAAVPEIKTPEAADAPK 526
T + P+ K ++ +A K
Sbjct: 1860 TPKKSPPGSPKKKKSKSPEAEK 1881
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = -3
Query: 756 KVEE-PAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPNMVKKIDLAP 592
KVEE PA+ + KT ++ E+ KE+ PS+ + +S P ++ +P
Sbjct: 1800 KVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSP 1859
Query: 591 TVESDAAAVPEIKTPEAADAPK 526
T + P+ K ++ +A K
Sbjct: 1860 TPKKSPPGSPKKKKSKSPEAEK 1881
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = -3
Query: 756 KVEE-PAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPNMVKKIDLAP 592
KVEE PA+ + KT ++ E+ KE+ PS+ + +S P ++ +P
Sbjct: 1800 KVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSP 1859
Query: 591 TVESDAAAVPEIKTPEAADAPK 526
T + P+ K ++ +A K
Sbjct: 1860 TPKKSPPGSPKKKKSKSPEAEK 1881
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 615 VKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 484
V +DL T E+ +PEI TP D+ + +N V+ + ++I
Sbjct: 289 VPSLDLEETTENPE--IPEISTPREEDSAENLENLVENSEKSEI 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,934,890
Number of Sequences: 27780
Number of extensions: 191186
Number of successful extensions: 711
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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