Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_K02
         (767 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe...    27   3.0  
SPAC24B11.06c |sty1|spc1, phh1|MAP kinase Sty1|Schizosaccharomyc...    26   6.8  

>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 969

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 369 RESVNYCRFI*IQSLILFINLI*YVQIYRNNNYLSLTVSAI 491
           +E + Y  F  ++ +  FINL  +VQ  R++ YL   + A+
Sbjct: 787 KEQLGYIVFTLVRQVTPFINLNIFVQSERSSTYLESRIRAL 827


>SPAC24B11.06c |sty1|spc1, phh1|MAP kinase Sty1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 349

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 578 RHLAPSNLITMSDILIQEFE 637
           +HL   N+I++SDI I  FE
Sbjct: 72  KHLRHENIISLSDIFISPFE 91


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,587,768
Number of Sequences: 5004
Number of extensions: 46751
Number of successful extensions: 62
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)