Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_K02
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0072 + 17054137-17054499                                         30   2.3  
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817           28   7.1  

>03_04_0072 + 17054137-17054499
          Length = 120

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 153 SEGHLTLSAGFRIGPPRRVPLAPRSPGPLPVV 58
           ++G   L+A   +G PRR+P +P  PG L VV
Sbjct: 65  ADGRRGLAARAPVGRPRRLPASPGFPGQLIVV 96


>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
          Length = 883

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 255 PPAVPRGRTISSTYTQ*VTDQY*FSYSPININ 350
           PPA PRGRT+  T     T +Y FSY  ++++
Sbjct: 686 PPAAPRGRTMPPT-----TGRYSFSYGGLSLS 712


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,784,056
Number of Sequences: 37544
Number of extensions: 313069
Number of successful extensions: 814
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)