Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_K02
         (767 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.       31   6.0  
S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growt...    31   6.0  
BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming gro...    31   6.0  
AC013451-1|AAF87081.1|  969|Homo sapiens LTBP-2 protein.               31   6.0  
AB209865-1|BAD93102.1| 1700|Homo sapiens latent transforming gro...    31   6.0  

>Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.
          Length = 1821

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -3

Query: 120 RIGPPRRVPLAPRSP--GPLPVVN-CEGECCRRWSXEN 16
           R+G P+R   AP +P  G L   N C G+CC  W+  N
Sbjct: 144 RLGTPQRSGAAPPTPPRGRLTGRNVCGGQCCPGWTTAN 181


>S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growth
           factor-beta-binding protein-2 protein.
          Length = 1821

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -3

Query: 120 RIGPPRRVPLAPRSP--GPLPVVN-CEGECCRRWSXEN 16
           R+G P+R   AP +P  G L   N C G+CC  W+  N
Sbjct: 144 RLGTPQRSGAAPPTPPRGRLTGRNVCGGQCCPGWTTAN 181


>BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming growth
           factor beta binding protein 2 protein.
          Length = 1821

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -3

Query: 120 RIGPPRRVPLAPRSP--GPLPVVN-CEGECCRRWSXEN 16
           R+G P+R   AP +P  G L   N C G+CC  W+  N
Sbjct: 144 RLGTPQRSGAAPPTPPRGRLTGRNVCGGQCCPGWTTAN 181


>AC013451-1|AAF87081.1|  969|Homo sapiens LTBP-2 protein.
          Length = 969

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -3

Query: 120 RIGPPRRVPLAPRSP--GPLPVVN-CEGECCRRWSXEN 16
           R+G P+R   AP +P  G L   N C G+CC  W+  N
Sbjct: 144 RLGTPQRSGAAPPTPPRGRLTGRNVCGGQCCPGWTTAN 181


>AB209865-1|BAD93102.1| 1700|Homo sapiens latent transforming growth
           factor beta binding protein 2 variant protein.
          Length = 1700

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -3

Query: 120 RIGPPRRVPLAPRSP--GPLPVVN-CEGECCRRWSXEN 16
           R+G P+R   AP +P  G L   N C G+CC  W+  N
Sbjct: 23  RLGTPQRSGAAPPTPPRGRLTGRNVCGGQCCPGWTTAN 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,924,685
Number of Sequences: 237096
Number of extensions: 1675326
Number of successful extensions: 3411
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3411
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)