Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_J24
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77654-3|CAB01129.1| 340|Caenorhabditis elegans Hypothetical pr... 170 1e-42
Z83234-4|CAB70168.1| 367|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z83128-3|CAB05637.1| 415|Caenorhabditis elegans Hypothetical pr... 30 1.9
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 30 1.9
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 30 1.9
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 30 1.9
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 1.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 1.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 1.9
AF273809-1|AAG15158.1| 418|Caenorhabditis elegans nuclear recep... 30 1.9
AC006695-7|AAM48553.1| 724|Caenorhabditis elegans Titin family ... 30 1.9
AC006695-6|AAU45229.1| 703|Caenorhabditis elegans Titin family ... 30 1.9
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ... 30 1.9
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ... 30 1.9
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ... 30 1.9
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ... 30 1.9
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ... 30 1.9
AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical ... 29 3.3
AF016657-12|AAB93656.1| 278|Caenorhabditis elegans Hypothetical... 28 5.8
Z46791-6|CAA86759.1| 395|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z77654-3|CAB01129.1| 340|Caenorhabditis elegans Hypothetical
protein C50B8.3 protein.
Length = 340
Score = 170 bits (413), Expect = 1e-42
Identities = 85/208 (40%), Positives = 128/208 (61%), Gaps = 1/208 (0%)
Frame = -2
Query: 672 MDPLLIARPGEIDLLWCFNSPTVLEKFVTTCDSDHGEGYSSCALEMSPAGRALFHGYLDT 493
++ + R E + + F++ L+ + CDSD EG+S+C+L S G A+F G + T
Sbjct: 122 LEDIGFVRHNEARVDYRFDTQEKLDLWKIGCDSDWKEGFSTCSLVNSDRGTAVFSGNIST 181
Query: 492 RVPKDGRIKKAGYCAMRSKMQRKSFKRASTFD-WHLYNTLVLKVRGDGRAYLLNISTEGY 316
+V KDGR+++AG+ +M+ + RK+F R W ++ L+LKVRGDGR+Y + + +
Sbjct: 182 KVLKDGRVERAGWASMKLE-DRKAFNRKKFLSKWRNFSHLLLKVRGDGRSYKIMLHSPLS 240
Query: 315 YDITWNDIYHYILYTRGGPYWQVAKIPFSKFVLGSKGRLQDKQTRMRFDKVTHFGISCGD 136
D TW D + + L+T GGPYWQ KIPFSKF GR+QD+Q R+ + + GI D
Sbjct: 241 MDFTWGDSFSHPLHTHGGPYWQYEKIPFSKFFHTVAGRIQDRQYRVNLEDTSSIGIVLMD 300
Query: 135 KIVGKFXLEIEYVGLEFDPTHDEEFADE 52
+I G F LEI+Y+G+ D TH E+FA E
Sbjct: 301 RIDGDFRLEIDYIGVYNDTTHVEDFAYE 328
>Z83234-4|CAB70168.1| 367|Caenorhabditis elegans Hypothetical
protein K09E4.1 protein.
Length = 367
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 300 NDIYHYILYTRGGPYWQVAKIPFSKFVLGSKGRLQD 193
+D +H LY RGGP + +KF LG+ GRL +
Sbjct: 127 DDAWHMSLYFRGGPTLEQCFAMRNKFTLGTAGRLAE 162
>Z83128-3|CAB05637.1| 415|Caenorhabditis elegans Hypothetical
protein W01D2.2b protein.
Length = 415
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 189 VCLANGLLIPKRTSRMESSQLANTVRLSYTEYNGKYRSKL 308
VC +NG P S M S+ + VR+ Y +Y+G + L
Sbjct: 261 VCYSNGSYHPASISDMPKSEGKHGVRIEYVDYSGVSQKSL 300
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 10 DCLDSNNVFLRFVHFVGKFFIVCWI 84
DCLDS FL F +FV F + W+
Sbjct: 328 DCLDSLPSFLAFFYFVTLIFFLAWL 352
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 10 DCLDSNNVFLRFVHFVGKFFIVCWI 84
DCLDS FL F +FV F + W+
Sbjct: 306 DCLDSLPSFLAFFYFVTLIFFLAWL 330
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 10 DCLDSNNVFLRFVHFVGKFFIVCWI 84
DCLDS FL F +FV F + W+
Sbjct: 328 DCLDSLPSFLAFFYFVTLIFFLAWL 352
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 615 SPTVLEKFVTTC--DSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAG 457
+PT L+ V TC +S+HG SSC +E++ + + + + +K+ G
Sbjct: 1007 APTNLDSGVYTCTAESEHGVSNSSCQVELTISAESSPESFEKVEITPPEEVKETG 1061
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 615 SPTVLEKFVTTC--DSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAG 457
+PT L+ V TC +S+HG SSC +E++ + + + + +K+ G
Sbjct: 1007 APTNLDSGVYTCTAESEHGVSNSSCQVELTISAESSPESFEKVEITPPEEVKETG 1061
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 615 SPTVLEKFVTTC--DSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAG 457
+PT L+ V TC +S+HG SSC +E++ + + + + +K+ G
Sbjct: 1007 APTNLDSGVYTCTAESEHGVSNSSCQVELTISAESSPESFEKVEITPPEEVKETG 1061
>AF273809-1|AAG15158.1| 418|Caenorhabditis elegans nuclear receptor
NHR-61 protein.
Length = 418
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 189 VCLANGLLIPKRTSRMESSQLANTVRLSYTEYNGKYRSKL 308
VC +NG P S M S+ + VR+ Y +Y+G + L
Sbjct: 264 VCYSNGSYHPASISDMPKSEGKHGVRIEYVDYSGVSQKSL 303
>AC006695-7|AAM48553.1| 724|Caenorhabditis elegans Titin family
protein 1, isoform a protein.
Length = 724
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 615 SPTVLEKFVTTC--DSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAG 457
+PT L+ V TC +S+HG SSC +E++ + + + + +K+ G
Sbjct: 602 APTNLDSGVYTCTAESEHGVSNSSCQVELTISAESSPESFEKVEITPPEEVKETG 656
>AC006695-6|AAU45229.1| 703|Caenorhabditis elegans Titin family
protein 1, isoform b protein.
Length = 703
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 615 SPTVLEKFVTTC--DSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAG 457
+PT L+ V TC +S+HG SSC +E++ + + + + +K+ G
Sbjct: 581 APTNLDSGVYTCTAESEHGVSNSSCQVELTISAESSPESFEKVEITPPEEVKETG 635
>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform g protein.
Length = 1769
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 615 SPTVLEKFVTTC--DSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAG 457
+PT L+ V TC +S+HG SSC +E++ + + + + +K+ G
Sbjct: 1007 APTNLDSGVYTCTAESEHGVSNSSCQVELTISAESSPESFEKVEITPPEEVKETG 1061
>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform f protein.
Length = 1769
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 615 SPTVLEKFVTTC--DSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAG 457
+PT L+ V TC +S+HG SSC +E++ + + + + +K+ G
Sbjct: 1007 APTNLDSGVYTCTAESEHGVSNSSCQVELTISAESSPESFEKVEITPPEEVKETG 1061
>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform e protein.
Length = 1769
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 615 SPTVLEKFVTTC--DSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAG 457
+PT L+ V TC +S+HG SSC +E++ + + + + +K+ G
Sbjct: 1007 APTNLDSGVYTCTAESEHGVSNSSCQVELTISAESSPESFEKVEITPPEEVKETG 1061
>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform d protein.
Length = 1769
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 615 SPTVLEKFVTTC--DSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAG 457
+PT L+ V TC +S+HG SSC +E++ + + + + +K+ G
Sbjct: 1007 APTNLDSGVYTCTAESEHGVSNSSCQVELTISAESSPESFEKVEITPPEEVKETG 1061
>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform c protein.
Length = 1769
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 615 SPTVLEKFVTTC--DSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAG 457
+PT L+ V TC +S+HG SSC +E++ + + + + +K+ G
Sbjct: 1007 APTNLDSGVYTCTAESEHGVSNSSCQVELTISAESSPESFEKVEITPPEEVKETG 1061
>AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical
protein K02F6.4 protein.
Length = 1193
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 92 KPTYSISXLNLPTILSPQDIPK*VTLSKRILVCLSCKRPFDPKTNFENGIFATCQ 256
+ T SI LP +L+ QD+ K + L +++ + K+ T F + +FA Q
Sbjct: 596 RATGSIDPTKLPNLLASQDLGKGLQLLRQLSEVNNKKKIVTDVTKFSDSVFAEVQ 650
>AF016657-12|AAB93656.1| 278|Caenorhabditis elegans Hypothetical
protein C16C4.11 protein.
Length = 278
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 68 KNLPTKWTKRRKTLLLSRQSRC 3
KN KWTKR + L+R SRC
Sbjct: 84 KNEMMKWTKRGTWIFLTRPSRC 105
>Z46791-6|CAA86759.1| 395|Caenorhabditis elegans Hypothetical
protein C09G5.7 protein.
Length = 395
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 304 LERYLPLYSVYERRTVLASCEDSILEVRFGIKRPFARQTNENAFRQS 164
LE LY + R TV+ + DSI + F++Q NE+ R+S
Sbjct: 273 LEERTDLY--FSRETVIYNTTDSIFNLCHNAIERFSQQNNEDTIRKS 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,874,701
Number of Sequences: 27780
Number of extensions: 332722
Number of successful extensions: 938
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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