Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_J22
(761 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 34 0.025
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 33 0.059
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.059
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 32 0.10
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.72
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 29 0.96
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 29 0.96
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 28 1.3
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.7
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 28 1.7
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 28 1.7
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 28 1.7
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 2.2
SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 2.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.2
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 26 6.7
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 26 6.7
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 26 6.7
SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit... 25 8.9
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 33.9 bits (74), Expect = 0.025
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = -2
Query: 427 LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKE 248
LE+E + + LKSLE ++ + EE ++ LT +LK + + Q+E
Sbjct: 897 LEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKSSDLGKKLTARQEE 956
Query: 247 VDRLEDELVAEKE 209
+ L++E +++ +
Sbjct: 957 ISNLKEENMSQSQ 969
Score = 27.1 bits (57), Expect = 2.9
Identities = 29/148 (19%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Frame = -2
Query: 682 TATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVAR 503
T ++L++A E+ K L+ + + + + +K+ EEA
Sbjct: 382 TIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQLEEARSSLAHATG 441
Query: 502 KLAMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKA--NQREEEYKNQI 329
KLA + ++ ++E++LR N+ S E+ E+ A +++++E N
Sbjct: 442 KLAEINSE----RDFQNKKIKDFEKIEQDLRACLNS-SSNELKEKSALIDKKDQELNN-- 494
Query: 328 KTLTTRLKXXXXXXXXXXRSVQKLQKEV 245
L ++K S+Q LQ+++
Sbjct: 495 --LREQIKEQKKVSESTQSSLQSLQRDI 520
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 32.7 bits (71), Expect = 0.059
Identities = 27/136 (19%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
Frame = -2
Query: 601 LADEERMDALENQLKEARFLAEEADKKYDE-VARKLAMVEADLXXXXXXXXXXXSKIVEL 425
L ++ L+ Q + ++F + K+ DE + +L + ++ ++ E+
Sbjct: 367 LLKNQKQSLLDKQSRTSQFTTK---KERDEWIRNQLLQINRNINSTKENSDYLKTEYDEM 423
Query: 424 EEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEV 245
E EL+ + K +E+S E R + I ++ R + R KL+ +
Sbjct: 424 ENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKRKSLWREEAKLKSSI 483
Query: 244 DRLEDELVAEKEKXQG 197
+ ++D+L + EK G
Sbjct: 484 ENVKDDL-SRSEKALG 498
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.7 bits (71), Expect = 0.059
Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = -2
Query: 670 KLSEASQAADESERARKVLENRSLADEE-RMDALENQLKEARFLAEEADKKYDEVARKLA 494
KL + + A S+ ++E S R++ L N+L+ + ++ +KK++E L
Sbjct: 642 KLLDMAPATPNSKLNTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSLQ 701
Query: 493 MVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTT 314
+ ++++ S +E +L KSL +SE ++ +E YK+ + L +
Sbjct: 702 LEKSNIQLQLTSLTSERSLALEKLNDLE------KSLVLSERSKDELDESYKSLQEQLAS 755
Query: 313 R 311
+
Sbjct: 756 K 756
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 31.9 bits (69), Expect = 0.10
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Frame = -2
Query: 592 EERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXS-------KI 434
E+ + +++L E + E+++ Y+ V + +E +L S +I
Sbjct: 796 EKEFNQYKHKLDEFTPILEKSENDYNGVKLECEQLEGELQNHQQSLVQGESTTSLIKTEI 855
Query: 433 VELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQ 254
ELE L +N K L E + + +I +L+T +K ++QKL
Sbjct: 856 AELELSLVNEEHNRKKLTELIEIESAKFSGLNKEIDSLSTSMKTFESEINNGELTIQKLN 915
Query: 253 KEVDRLEDE 227
E DRLE E
Sbjct: 916 HEFDRLERE 924
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.1 bits (62), Expect = 0.72
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 3/158 (1%)
Frame = -2
Query: 676 TAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKL 497
T L E A E + + +R ER+ +LENQ+ AD+KY+ + +
Sbjct: 873 TNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQV-------TIADEKYEFLYAEK 925
Query: 496 AMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKN---QIK 326
+E DL LE++L + K + K + E++Y N +
Sbjct: 926 QSIEEDLANKQTEISYLSDLSSTLEKKLSSI---KKDEQTISSKYKELEKDYLNIMADYQ 982
Query: 325 TLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEK 212
+ L ++++L +++ RL+DEL+ ++
Sbjct: 983 HSSQHLSNLEKAINEKNLNIRELNEKLMRLDDELLLKQ 1020
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 28.7 bits (61), Expect = 0.96
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Frame = -2
Query: 574 LENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEELRVVG-- 401
LEN ++ R L+E +K+ DE+ L +E L +I + +++ +
Sbjct: 124 LENLDEQTRKLSERTEKQQDELDIALDDLEETLNTLKRTSENRDREIARISQDVYTMSTI 183
Query: 400 ---NNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLE 233
+L+ ++ S+E+A Q + ++ L T K S+ L+ +D E
Sbjct: 184 TLPQSLEQIKKSQEEALQNLSREISSLRCLQTDSKKDDTFATTSNSSIPVLENPLDTSE 242
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 28.7 bits (61), Expect = 0.96
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 288 PSSPSVPCRNCKRRSIGLKTNLSPKR 211
P+SP+VP + S+ TN+SP+R
Sbjct: 138 PNSPTVPSKFSLNPSVATSTNISPRR 163
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +1
Query: 256 AVSAR--NARRTRHVLQPPSDGW 318
+V+AR N RR RHVL P +GW
Sbjct: 211 SVNARHDNLRRKRHVLVQPQEGW 233
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 439 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTL 320
+I +L EE + + ++ LE E+AN E+Y+ Q + L
Sbjct: 147 QITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEAL 186
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.7
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Frame = -2
Query: 634 ERARKVLENRSLADEERMDALENQLKEARFLAEE----ADK--KYDEVARKLAMVE 485
E +RK +E + LEN++KEAR + EE A+K YDE+ R+L++++
Sbjct: 303 EASRKEMETHCAT----IQTLENEVKEARKVKEESLTLANKFSDYDEIKRELSVLK 354
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +1
Query: 538 QRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRD 690
+RG + R R +P P SR+PY R RR PR R RS D
Sbjct: 101 ERGGRVHGDSGRLRSRSPSPHEARSRSPYNDERSDRRSMSPRYRSRSRSPD 151
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +1
Query: 364 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPHRISCRPP 537
PSP+ LP S Y + PP + P+ A P+ Q +IS PP
Sbjct: 402 PSPMELPSPSTVYHQVFYPPTSTSVSSYGLGKTPQPAYGSSSPYVNGHQTQQISSLPP 459
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 2.2
Identities = 18/75 (24%), Positives = 38/75 (50%)
Frame = -2
Query: 430 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 251
E +L V+ N+KS + ++ +E+K +++ L +L ++ ++
Sbjct: 483 EQARKLEVLDLNVKSSREQLQYVSKSNQEHKKEVEALQLQL-------VNSSTELESVKS 535
Query: 250 EVDRLEDELVAEKEK 206
E ++L++ELV E EK
Sbjct: 536 ENEKLKNELVLEIEK 550
>SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 268
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = -2
Query: 655 SQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYD 515
S +++ +R++L S + E D L + L+ RF+ ++A K Y+
Sbjct: 84 SLGSNQYSISRQLLRQPSFSSSENTDRLADLLRVRRFIYQKAWKSYE 130
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = -2
Query: 421 EELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVD 242
+ELR + NL+ + +++ + E + +L RLK ++ Q+ +
Sbjct: 713 KELRSINQNLQDIISRQDQRASKFAEELLHVNSLAERLKGELNASKGEKDLRKRTQERLI 772
Query: 241 RLEDELVAEKEK 206
D+L+AE+E+
Sbjct: 773 SENDKLLAERER 784
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 6.7
Identities = 21/92 (22%), Positives = 38/92 (41%)
Frame = -2
Query: 661 EASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 482
+A++ + E+ ++ L R+ E +D+ E K A+ +KK+ E R A
Sbjct: 180 QAAELRSKDEQVKE-LNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAA 238
Query: 481 DLXXXXXXXXXXXSKIVELEEELRVVGNNLKS 386
L + IV +EE + V K+
Sbjct: 239 QLQTIHEEYEQQQAHIVRMEELIHAVEKERKT 270
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 215 FGDKFVFKP--IDLLLQFLHGTLGELGTCFSLL 307
+G +FVF+ ID L + LH L +G C LL
Sbjct: 526 WGVRFVFQEDGIDFLKRLLHELLSRMGKCQVLL 558
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 478 SQPQPWPAYEQPHRISCRPPQRGTWLPSADS 570
S P P P QP ++S P LPSA S
Sbjct: 381 STPLPEPTPGQPRKVSGHNPPSARRLPSASS 411
>SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit
Rrn7 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 11 HVCMDFHNLKVRNTKYKLESMF 76
+VC F + + RN+KYK +SMF
Sbjct: 344 NVCYGFDDAQTRNSKYK-DSMF 364
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,452,502
Number of Sequences: 5004
Number of extensions: 47346
Number of successful extensions: 222
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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