Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_J20
         (493 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              48   5e-08
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               32   0.004
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   3.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   5.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   5.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.4  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 48.0 bits (109), Expect = 5e-08
 Identities = 37/136 (27%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
 Frame = -2

Query: 423 VLAFCALAVGVNALTEEQKAEITKSSLPLIAECSKEFSVNQGDIDAAKK-LGDPSGLN-S 250
           + AFC   VG+ A++EE   ++ K    + + C++E  ++    D  KK + D +    +
Sbjct: 7   IFAFCL--VGILAVSEESINKLRK----IESVCAEENGIDLKKADDVKKGIFDKNDEKLA 60

Query: 249 CFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPVSDSD 70
           C+V C +KK G +NA   F+     E+  +  T++ D +   +L   C     K +++S+
Sbjct: 61  CYVDCMLKKVGFVNADTTFN-----EEKFRERTTKLDSEQVNRLVNNC-----KDITESN 110

Query: 69  KGCERAKLLLDCFVAN 22
             C+++  LL CF+ N
Sbjct: 111 -SCKKSSKLLQCFIDN 125


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 31.9 bits (69), Expect = 0.004
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
 Frame = -2

Query: 330 ECSKEFSVNQGDIDAAKKLGDPSGLNS---CFVGCFMKKAGIINASGLFDVAATIEKSKK 160
           +C KE  V+   +   K  GD    +    C++ CFM K GI++ +   DV    +K+ +
Sbjct: 28  DCRKESKVSWAALKKMKA-GDMEQDDQNLKCYLKCFMTKHGILDKNAEVDV----QKALR 82

Query: 159 YL-TSEEDLKAFEKLTEMCAPENDKPVSDSDKGCERAKLLLDCFV 28
           +L  S +D  + +KL   C     K + + D  CE+A  L+ C+V
Sbjct: 83  HLPRSMQD--STKKLFNKC-----KSIQNEDP-CEKAYQLVKCYV 119


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 221 LESSTQVVFSM*PLLLRRARNILP 150
           L+S+ +VV  +  + L  A+NILP
Sbjct: 32  LDSNVEVVVGVPSIYLTYAKNILP 55


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 391 YTNSQCTECQYNKRIS*HFDVLYLLVLNRDSNS 489
           YTN   T   Y+      F+  ++  ++RDSNS
Sbjct: 288 YTNLSMTMKYYDYGADFPFNFAFIKNVSRDSNS 320


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 391 YTNSQCTECQYNKRIS*HFDVLYLLVLNRDSNS 489
           YTN   T   Y+      F+  ++  ++RDSNS
Sbjct: 288 YTNLSMTMKYYDYGADFPFNFAFIKNVSRDSNS 320


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 85  WFVIFWSAHLR 117
           WFV FW  H +
Sbjct: 425 WFVEFWEHHFQ 435


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 402 AVGVNALTEEQKAEITKSSLPL 337
           + G +++T+    E+T  S+PL
Sbjct: 787 SAGTSSITKYTGCELTSESMPL 808


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 402 AVGVNALTEEQKAEITKSSLPL 337
           + G +++T+    E+T  S+PL
Sbjct: 877 SAGTSSITKYTGCELTSESMPL 898


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,938
Number of Sequences: 438
Number of extensions: 2510
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)