Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_J19
         (345 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0249 - 27150928-27151146                                         27   3.9  
11_04_0195 - 14725553-14725571,14725988-14726079,14727214-147273...    27   5.2  
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754...    26   9.1  
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870...    26   9.1  

>02_05_0249 - 27150928-27151146
          Length = 72

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 151 IAHIIPNVITLLIVFSRA*RFSSIGSTLSPKGN 249
           +AH+ P ++  + VF R    +S G +LS  GN
Sbjct: 1   MAHLTPGLVWAVNVFPRRHHLASTGCSLSGSGN 33


>11_04_0195 -
           14725553-14725571,14725988-14726079,14727214-14727335,
           14727588-14727597,14727798-14727896,14728046-14728612
          Length = 302

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +3

Query: 114 TTMFQYQGSDSYNCTHYSKRYYAIDSVLACLT-----FFFHRIYSFSKGQSEHFAIN 269
           T  FQ +G   ++C  +     ++DSVLACL          ++ SF   Q E +++N
Sbjct: 227 TVNFQSRGLP-FSCKDHCDTIMSVDSVLACLASEALDLEKKQLQSFGMQQLERYSVN 282


>10_08_0259 +
           16274430-16274747,16275180-16275242,16275329-16275424,
           16275526-16275618,16276415-16276605,16276684-16276921,
           16277805-16277900,16278324-16278404,16278532-16278939,
           16279048-16279331,16279460-16279547,16279630-16279830,
           16280032-16280118,16280119-16280238,16280536-16280708,
           16281914-16282055,16282292-16282414,16282601-16282656,
           16282735-16283038,16283154-16283283,16283491-16283549,
           16283829-16284061,16285480-16285527,16285765-16285843,
           16285925-16286169,16286338-16286722
          Length = 1446

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 220 IGSTLSPKGNLNILRLTNLLETIIFQFYLYCIRE 321
           I S++S K   +  R+T  L  I  Q YLYC R+
Sbjct: 707 IPSSISAKLKPHQYRITITLVMISVQLYLYCYRK 740


>08_02_1563 +
           27886202-27886446,27886533-27886618,27886942-27887030,
           27887193-27887432,27887527-27887648,27888103-27888178,
           27888276-27888383,27888465-27888641,27888959-27889176,
           27889313-27889445,27889584-27889807,27890052-27890205,
           27890297-27890380
          Length = 651

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 186 DSVLACLTFFFHRIYSFSKGQSE 254
           D  L C  F  HRIY FS+ + E
Sbjct: 437 DPTLLCCAFKKHRIYLFSRREPE 459


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,175,480
Number of Sequences: 37544
Number of extensions: 139309
Number of successful extensions: 287
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 494158076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)