Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_J17
         (730 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3023|AAF50903.1|   95|Drosophila melanogaster CG15456-P...    78   1e-14
AY069569-1|AAL39714.1|  476|Drosophila melanogaster LD29847p pro...    29   6.5  
AE014134-1100|AAF52389.2|  476|Drosophila melanogaster CG9539-PA...    29   6.5  
AB062670-1|BAB78518.1|  476|Drosophila melanogaster DSec61alpha ...    29   6.5  

>AE014298-3023|AAF50903.1|   95|Drosophila melanogaster CG15456-PA
           protein.
          Length = 95

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
 Frame = -3

Query: 590 KVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMAL 411
           KV VEYCG C++ G C  L + +   +P   + C+ GR+GSFEV ++ +L++SKL  +A 
Sbjct: 3   KVEVEYCGICNFSGQCHLLREFLLASSPDLDISCRTGRRGSFEVSIDGQLVHSKLSCLAF 62

Query: 410 PDYGEVAQVVHDVSKGQEPREIKGEQPI-NCAI 315
           P +  V   V    +G EP E   EQPI +C +
Sbjct: 63  PQHASVLAQVQKAERG-EPVEKVLEQPIKDCVV 94


>AY069569-1|AAL39714.1|  476|Drosophila melanogaster LD29847p
           protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +1

Query: 124 YVVGARTNCPYKSAQYSGSLCAAVNLIKYEQTVQSIVSHFQKSNMYLTT*LFSIILAG 297
           Y  G R + P KSA+Y G   +    + Y   +  I+     SN+Y+ + + ++   G
Sbjct: 257 YFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQG 314


>AE014134-1100|AAF52389.2|  476|Drosophila melanogaster CG9539-PA
           protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +1

Query: 124 YVVGARTNCPYKSAQYSGSLCAAVNLIKYEQTVQSIVSHFQKSNMYLTT*LFSIILAG 297
           Y  G R + P KSA+Y G   +    + Y   +  I+     SN+Y+ + + ++   G
Sbjct: 257 YFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQG 314


>AB062670-1|BAB78518.1|  476|Drosophila melanogaster DSec61alpha
           protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +1

Query: 124 YVVGARTNCPYKSAQYSGSLCAAVNLIKYEQTVQSIVSHFQKSNMYLTT*LFSIILAG 297
           Y  G R + P KSA+Y G   +    + Y   +  I+     SN+Y+ + + ++   G
Sbjct: 257 YFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQG 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,662,583
Number of Sequences: 53049
Number of extensions: 593515
Number of successful extensions: 1265
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)