Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_J12
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 197 8e-51
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 197 8e-51
AJ270981-1|CAB65903.1| 223|Caenorhabditis elegans heat shock pr... 94 9e-20
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 41 8e-04
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 40 0.003
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 40 0.003
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 31 0.68
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 31 1.2
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 31 1.2
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 29 2.7
U80031-2|AAB37612.1| 468|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical ... 29 3.6
U61948-3|AAB03145.1| 335|Caenorhabditis elegans Hypothetical pr... 29 4.8
U41548-2|AAA83204.1| 399|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81495-11|CAN99657.1| 339|Caenorhabditis elegans Hypothetical p... 28 6.3
Z81495-10|CAD57692.1| 480|Caenorhabditis elegans Hypothetical p... 28 6.3
Z81495-9|CAB04064.1| 389|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL032644-11|CAN99705.1| 339|Caenorhabditis elegans Hypothetical... 28 6.3
AL032644-10|CAD57710.1| 480|Caenorhabditis elegans Hypothetical... 28 6.3
AL032644-9|CAA21673.1| 389|Caenorhabditis elegans Hypothetical ... 28 6.3
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 197 bits (480), Expect = 8e-51
Identities = 101/162 (62%), Positives = 119/162 (73%), Gaps = 1/162 (0%)
Frame = -2
Query: 764 RLXRLASGVAVLHVGGSSEVEVNEXKDRVNDALNATRAAVEEGIVPGGGSALLRCIPVLE 585
RL +L+ GVAVL +GG SEVEV E KDRV DAL ATRAAVEEGIVPGGG ALLR + L+
Sbjct: 384 RLAKLSKGVAVLKIGGGSEVEVGEKKDRVTDALCATRAAVEEGIVPGGGVALLRSLTALK 443
Query: 584 QLKTVNSDQATGVEIVMKALRMPCMTIAKNAGIDGSVVVAKVE-DLGDEFGYDALNNEYV 408
K N DQ GV IV KAL P TI KNAG++ S ++ +V + +GYDALN ++V
Sbjct: 444 NYKAANEDQQIGVNIVKKALTQPIATIVKNAGLEPSSIIDEVTGNSNTSYGYDALNGKFV 503
Query: 407 NMIEKGIIDPTKVVRTALTDASGVASLLTTAEAVICEIPQEK 282
+M E GIIDPTKVVRTAL DASGVASLL T E V+ EIP+E+
Sbjct: 504 DMFEAGIIDPTKVVRTALQDASGVASLLATTECVVTEIPKEE 545
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 197 bits (480), Expect = 8e-51
Identities = 101/162 (62%), Positives = 119/162 (73%), Gaps = 1/162 (0%)
Frame = -2
Query: 764 RLXRLASGVAVLHVGGSSEVEVNEXKDRVNDALNATRAAVEEGIVPGGGSALLRCIPVLE 585
RL +L+ GVAVL +GG SEVEV E KDRV DAL ATRAAVEEGIVPGGG ALLR + L+
Sbjct: 384 RLAKLSKGVAVLKIGGGSEVEVGEKKDRVTDALCATRAAVEEGIVPGGGVALLRSLTALK 443
Query: 584 QLKTVNSDQATGVEIVMKALRMPCMTIAKNAGIDGSVVVAKVE-DLGDEFGYDALNNEYV 408
K N DQ GV IV KAL P TI KNAG++ S ++ +V + +GYDALN ++V
Sbjct: 444 NYKAANEDQQIGVNIVKKALTQPIATIVKNAGLEPSSIIDEVTGNSNTSYGYDALNGKFV 503
Query: 407 NMIEKGIIDPTKVVRTALTDASGVASLLTTAEAVICEIPQEK 282
+M E GIIDPTKVVRTAL DASGVASLL T E V+ EIP+E+
Sbjct: 504 DMFEAGIIDPTKVVRTALQDASGVASLLATTECVVTEIPKEE 545
>AJ270981-1|CAB65903.1| 223|Caenorhabditis elegans heat shock
protein 60 protein.
Length = 223
Score = 94.3 bits (224), Expect = 9e-20
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = -2
Query: 764 RLXRLASGVAVLHVGGSSEVEVNEXKDRVNDALNATRAAVEEGIVPGGGSALLRCIPVLE 585
RL +L+ GVAVL +GG SEVEV E KDRV DAL ATRAAVEEGIVPGGG ALLR + L+
Sbjct: 153 RLAKLSKGVAVLKIGGGSEVEVGEKKDRVTDALCATRAAVEEGIVPGGGVALLRSLTALK 212
Query: 584 QLKTVNSDQ 558
K N DQ
Sbjct: 213 NYKAANEDQ 221
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 41.1 bits (92), Expect = 8e-04
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Frame = -2
Query: 719 GSSEVEVNEXKDRVNDALNATRAAV-EEGIVPGGGSALLRCIPVLEQL-KTVNSDQATGV 546
GS+++ + E ++DAL R V ++ ++PGGG+ + L L +T +
Sbjct: 392 GSNKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCW 451
Query: 545 EIVMKALRMPCMTIAKNAGIDGSVVVAKVEDL----GDEFGYDALNNEYVNMIEKGIIDP 378
AL + T+A+NAG+ V ++ + +G + +M+E+ ++ P
Sbjct: 452 RAFADALELIPYTLAENAGLSPIHTVTELRNNHANGNSSYGVNVRKGYVTDMVEEDVVQP 511
Query: 377 TKVVRTALTDASG-VASLLTTAEAVI 303
V +A+ AS V S+L + V+
Sbjct: 512 LLVTASAIKQASECVRSILKIDDIVM 537
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 41.1 bits (92), Expect = 8e-04
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Frame = -2
Query: 719 GSSEVEVNEXKDRVNDALNATRAAV-EEGIVPGGGSALLRCIPVLEQL-KTVNSDQATGV 546
GS+++ + E ++DAL R V ++ ++PGGG+ + L L +T +
Sbjct: 392 GSNKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCW 451
Query: 545 EIVMKALRMPCMTIAKNAGIDGSVVVAKVEDL----GDEFGYDALNNEYVNMIEKGIIDP 378
AL + T+A+NAG+ V ++ + +G + +M+E+ ++ P
Sbjct: 452 RAFADALELIPYTLAENAGLSPIHTVTELRNNHANGNSSYGVNVRKGYVTDMVEEDVVQP 511
Query: 377 TKVVRTALTDASG-VASLLTTAEAVI 303
V +A+ AS V S+L + V+
Sbjct: 512 LLVTASAIKQASECVRSILKIDDIVM 537
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 39.5 bits (88), Expect = 0.003
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Frame = -2
Query: 731 LHVGGSSEVEVNEXKDRVNDALNATRAAVEEG-IVPGGGSA-LLRCIPVLEQLKTVNSDQ 558
+ V G +++ ++E K ++DAL R V + IV GGGSA L I V ++ ++ +
Sbjct: 384 IFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIE 443
Query: 557 ATGVEIVMKALRMPCMTIAKNAGIDGSVVVAKVEDLGDEFGYDALNNEYVNMIEKGIIDP 378
AL M +A+N+G+ ++ ++ E G +L + V +
Sbjct: 444 QYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAV-FAGTNDMKE 502
Query: 377 TKVVRTALTDASGVASLLTTAEAVICEIPQEKEPN 273
KV+ T L+ + SL T +I +I + P+
Sbjct: 503 QKVIETLLSKREQI-SLATQVVRMILKIDDVRVPD 536
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 39.5 bits (88), Expect = 0.003
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Frame = -2
Query: 731 LHVGGSSEVEVNEXKDRVNDALNATRAAVEEG-IVPGGGSA-LLRCIPVLEQLKTVNSDQ 558
+ V G +++ ++E K ++DAL R V + IV GGGSA L I V ++ ++ +
Sbjct: 384 IFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIE 443
Query: 557 ATGVEIVMKALRMPCMTIAKNAGIDGSVVVAKVEDLGDEFGYDALNNEYVNMIEKGIIDP 378
AL M +A+N+G+ ++ ++ E G +L + V +
Sbjct: 444 QYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAV-FAGTNDMKE 502
Query: 377 TKVVRTALTDASGVASLLTTAEAVICEIPQEKEPN 273
KV+ T L+ + SL T +I +I + P+
Sbjct: 503 QKVIETLLSKREQI-SLATQVVRMILKIDDVRVPD 536
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 39.5 bits (88), Expect = 0.003
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Frame = -2
Query: 731 LHVGGSSEVEVNEXKDRVNDALNATRAAVEEG-IVPGGGSA-LLRCIPVLEQLKTVNSDQ 558
+ V G +++ ++E K ++DAL R V + IV GGGSA L I V ++ ++ +
Sbjct: 178 IFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIE 237
Query: 557 ATGVEIVMKALRMPCMTIAKNAGIDGSVVVAKVEDLGDEFGYDALNNEYVNMIEKGIIDP 378
AL M +A+N+G+ ++ ++ E G +L + V +
Sbjct: 238 QYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAV-FAGTNDMKE 296
Query: 377 TKVVRTALTDASGVASLLTTAEAVICEIPQEKEPN 273
KV+ T L+ + SL T +I +I + P+
Sbjct: 297 QKVIETLLSKREQI-SLATQVVRMILKIDDVRVPD 330
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 39.5 bits (88), Expect = 0.003
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Frame = -2
Query: 731 LHVGGSSEVEVNEXKDRVNDALNATRAAVEEG-IVPGGGSA-LLRCIPVLEQLKTVNSDQ 558
+ V G +++ ++E K ++DAL R V + IV GGGSA L I V ++ ++ +
Sbjct: 384 IFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIE 443
Query: 557 ATGVEIVMKALRMPCMTIAKNAGIDGSVVVAKVEDLGDEFGYDALNNEYVNMIEKGIIDP 378
AL M +A+N+G+ ++ ++ E G +L + V +
Sbjct: 444 QYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAV-FAGTNDMKE 502
Query: 377 TKVVRTALTDASGVASLLTTAEAVICEIPQEKEPN 273
KV+ T L+ + SL T +I +I + P+
Sbjct: 503 QKVIETLLSKREQI-SLATQVVRMILKIDDVRVPD 536
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 31.5 bits (68), Expect = 0.68
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Frame = -2
Query: 719 GSSEVEVNEXKDRVNDALNATRAAVE-EGIVPGGGSALLRCIPVL-EQLKTVNSDQATGV 546
G +E + E + ++DA+ R A + + IV GGG+ + ++ E K +
Sbjct: 374 GGAEQFIAETERSLHDAIMIVRRAKKNDSIVAGGGAIEMELSRLIREHSKGIEGKDQAFW 433
Query: 545 EIVMKALRMPCMTIAKNAGIDGSVVVAKVED---LGDEF-GYDALNNEYVNMIEKGIIDP 378
+A + + +NAG+D V+ K+ G+++ G D + + + +P
Sbjct: 434 MAYGQAFEIIPRQLCQNAGLDALDVLNKLRHRHAQGEKWAGIDIHREAVGDNLVACVWEP 493
Query: 377 TKVVRTALTDASGVASLLTTAEAVI 303
+ V R A+T A+ A L+ + + +
Sbjct: 494 SIVKRNAITAATEAACLVLSIDQTV 518
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 431 HTQIHLQGLPPWQQQQNHQCLHFLLLSCMASSELSLQSLHQWPDH 565
H Q+H+Q LP QQQ H ++ Q +HQ P H
Sbjct: 1170 HPQMHMQMLPQHHQQQQHHEEMMMMHHQQQQQLQQQQQMHQMPLH 1214
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 644 EEGIVPGGGSALLRCIPVLEQLKTVNSDQATGVEIVM-KALRMPCMTIAKNAGIDGSVVV 468
+EG G G L + IPVL QLK +D +G M A++ P + D S +V
Sbjct: 341 DEGGGGGVGGLLRKRIPVLAQLKAAATDSNSGAATAMTTAIQPPNTNLNSITNSDNSKLV 400
Query: 467 A 465
A
Sbjct: 401 A 401
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 29.5 bits (63), Expect = 2.7
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Frame = -2
Query: 719 GSSEVEVNEXKDRVNDALNATR-AAVEEGIVPGGGSALLRCIPVLEQL-KTVNSDQATGV 546
G S+ +NE + + D+L+ R + +VPGGG+ + +EQ ++ +
Sbjct: 380 GPSKDVINEVERNLQDSLHVVRNIMINPKLVPGGGALEMALSREIEQQGAKMDGVKKWPY 439
Query: 545 EIVMKALRMPCMTIAKNAG---IDGSVVVAKVEDLGDE---FGYDALNNEYVNMIEKGII 384
+ + AL + T+ +N G I + + E FG D + + V+M + I
Sbjct: 440 KAIGLALEVIPRTLIQNCGGSTIRKMTELRAIHAQNAENWTFGVDGTSGDLVDMNKLEIW 499
Query: 383 DPTKVVRTALTDASGVASLLTTAEAVI 303
DP V L A + +L + ++
Sbjct: 500 DPLAVRIQVLKTAIETSVMLLRIDDIV 526
>U80031-2|AAB37612.1| 468|Caenorhabditis elegans Hypothetical
protein B0554.5 protein.
Length = 468
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/103 (20%), Positives = 44/103 (42%)
Frame = +3
Query: 372 LCGVNDALFNHVYIFIVEGIIPKFISKVFHLGNNNRTINACIFCYCHAWHPQSFHYNLYT 551
+CG+ D N V I ++PK ++ F + + +CI + P +YT
Sbjct: 369 ICGIGDCCINSVRSVICALVMPKRRAQAFSVSKIYQAFGSCILFFLSPITP----LYVYT 424
Query: 552 SGLITVDCFELF*YWNTSQECRTTSRYNTFLNCSSSSIKGIIN 680
GL + +++ ++ + T R T + +++ I +N
Sbjct: 425 IGLPILAIIATILFFSIAKRTQITERKMTEASRNAAEIGKKLN 467
>AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical
protein Y116A8A.6 protein.
Length = 456
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +1
Query: 319 VVSSDATPLASVRAVRTTFVGSMMPFSIMFTYSLLRASYPNSSPRSSTLATTTEPS 486
+++++ TP+ + R+ +T + + + +IM +AS ++SP SS ATTTEPS
Sbjct: 288 ILTTEPTPVTTERSTVSTTISTSLETTIM------QAS--SASPISSKPATTTEPS 335
>U61948-3|AAB03145.1| 335|Caenorhabditis elegans Hypothetical
protein C46A5.5 protein.
Length = 335
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = -2
Query: 716 SSEVEVNEXKDRVNDALNATRAAVEEGIVPGGGSALLRCIPVLEQLKTVNSDQATGV 546
S ++ + K+R A+ A + + + ALLRC ++ KT N + V
Sbjct: 105 SKRQKIKKTKERKKHAIQAAKTRKQRNEIEEASQALLRCFRLVGNAKTKNGKRNISV 161
>U41548-2|AAA83204.1| 399|Caenorhabditis elegans Hypothetical
protein M02F4.1 protein.
Length = 399
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 345 GIGQGCPHHLCGVNDALFNHVYIFIVEGI-IPKFISKVFHLGNNNRTI 485
GI QG PH LC ND +H + I I + + I K+F+ N +I
Sbjct: 343 GIQQGSPHVLCAKND---DHCFKKIQNTILVTEAIGKIFNRENTAHSI 387
>Z81495-11|CAN99657.1| 339|Caenorhabditis elegans Hypothetical
protein Y51H1A.1c protein.
Length = 339
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 56 QASLPSLLKHPLNKILSFT-----AFSIQFSPLNNSKYPFTFVTICIHKCI 193
Q L SLLKH +N +++ T F + +N YPF T H+C+
Sbjct: 246 QRRLNSLLKHSINHVMTCTLCKQKGFCCELCTVNEVIYPFN--TESTHRCL 294
>Z81495-10|CAD57692.1| 480|Caenorhabditis elegans Hypothetical
protein Y51H1A.1b protein.
Length = 480
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 56 QASLPSLLKHPLNKILSFT-----AFSIQFSPLNNSKYPFTFVTICIHKCI 193
Q L SLLKH +N +++ T F + +N YPF T H+C+
Sbjct: 387 QRRLNSLLKHSINHVMTCTLCKQKGFCCELCTVNEVIYPFN--TESTHRCL 435
>Z81495-9|CAB04064.1| 389|Caenorhabditis elegans Hypothetical
protein Y51H1A.1a protein.
Length = 389
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 56 QASLPSLLKHPLNKILSFT-----AFSIQFSPLNNSKYPFTFVTICIHKCI 193
Q L SLLKH +N +++ T F + +N YPF T H+C+
Sbjct: 296 QRRLNSLLKHSINHVMTCTLCKQKGFCCELCTVNEVIYPFN--TESTHRCL 344
>AL032644-11|CAN99705.1| 339|Caenorhabditis elegans Hypothetical
protein Y51H1A.1c protein.
Length = 339
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 56 QASLPSLLKHPLNKILSFT-----AFSIQFSPLNNSKYPFTFVTICIHKCI 193
Q L SLLKH +N +++ T F + +N YPF T H+C+
Sbjct: 246 QRRLNSLLKHSINHVMTCTLCKQKGFCCELCTVNEVIYPFN--TESTHRCL 294
>AL032644-10|CAD57710.1| 480|Caenorhabditis elegans Hypothetical
protein Y51H1A.1b protein.
Length = 480
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 56 QASLPSLLKHPLNKILSFT-----AFSIQFSPLNNSKYPFTFVTICIHKCI 193
Q L SLLKH +N +++ T F + +N YPF T H+C+
Sbjct: 387 QRRLNSLLKHSINHVMTCTLCKQKGFCCELCTVNEVIYPFN--TESTHRCL 435
>AL032644-9|CAA21673.1| 389|Caenorhabditis elegans Hypothetical
protein Y51H1A.1a protein.
Length = 389
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 56 QASLPSLLKHPLNKILSFT-----AFSIQFSPLNNSKYPFTFVTICIHKCI 193
Q L SLLKH +N +++ T F + +N YPF T H+C+
Sbjct: 296 QRRLNSLLKHSINHVMTCTLCKQKGFCCELCTVNEVIYPFN--TESTHRCL 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,950,283
Number of Sequences: 27780
Number of extensions: 322983
Number of successful extensions: 1028
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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