Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_J12
(765 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 25 0.58
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 2.4
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 23 4.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 9.5
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 9.5
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 9.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.5
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 9.5
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 9.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.5
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 25.4 bits (53), Expect = 0.58
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = -2
Query: 689 KDRVNDALNATRAAV-EEGIVPGG--GSALLRCIPVLEQL 579
K N++LNA R + +EG++ GG G+AL+ + + + +
Sbjct: 283 KTEDNESLNAARMLIRQEGLLCGGSSGAALIAALKIAKDI 322
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 440 FGYDALNNEYVNMIEKGIIDPT 375
FG D LNN ++ M E +IDP+
Sbjct: 88 FGTDKLNNPFIGMGE-FLIDPS 108
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -2
Query: 752 LASGVAVLHVGGSSEVEVNEXKDRVNDALNATRAAVEEGIVPGG 621
LA+G + + + +E N D + + L + +EE +P G
Sbjct: 12 LANGEEIKTIYSWNVIEYNFPNDNIRNTLISNGDYIEENNMPNG 55
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/28 (25%), Positives = 13/28 (46%)
Frame = +3
Query: 3 NTLFALTAGKLSSLNHSHKPACLLCSNI 86
N L+ +T + + P C +C N+
Sbjct: 394 NKLYGMTPSDIDKYSRIVFPVCFVCFNL 421
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/28 (25%), Positives = 13/28 (46%)
Frame = +3
Query: 3 NTLFALTAGKLSSLNHSHKPACLLCSNI 86
N L+ +T + + P C +C N+
Sbjct: 394 NKLYGMTPSDIDKYSRIVFPVCFVCFNL 421
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 540 CNESSEDAMHDNSKKC 493
CN SS D ++S KC
Sbjct: 363 CNNSSSDKERNSSFKC 378
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 458 PPWQQQQNHQCLHFLLLSCMASS 526
PP++ + Q +H + SC+A S
Sbjct: 63 PPFRAEDYRQEVHAQVYSCLARS 85
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.4 bits (43), Expect = 9.5
Identities = 5/19 (26%), Positives = 13/19 (68%)
Frame = +3
Query: 273 VRLFFLWNFTDHSFGSSKQ 329
+++ + W + D+ FGS ++
Sbjct: 29 LKVIYEWKYIDYDFGSDEK 47
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/28 (25%), Positives = 13/28 (46%)
Frame = +3
Query: 3 NTLFALTAGKLSSLNHSHKPACLLCSNI 86
N L+ +T + + P C +C N+
Sbjct: 332 NKLYGMTPSDIDKYSRIVFPVCFVCFNL 359
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 9.5
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 27 GKLSSLNHS--HKPACLLCSNIHXTKSFHSLHFQFNSAH 137
GK+ + NH H+ AC S++ ++ LH +AH
Sbjct: 122 GKIYA-NHCELHRAACHSGSSLTKSRLMRCLHHDIENAH 159
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 449 QGLPPWQQQQNHQCLH 496
Q PP QQ +HQ H
Sbjct: 806 QSQPPHQQLHHHQSTH 821
Score = 21.4 bits (43), Expect = 9.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 407 LHIHC*GHHTQIHLQGLPPWQQQQNHQ 487
LH H H Q Q P QQQQ Q
Sbjct: 814 LHHHQ-STHPQAQAQAQPQQQQQQQQQ 839
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,460
Number of Sequences: 438
Number of extensions: 3665
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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